Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00100 ATGGAAGAGACCAAATCCAAGTTCAAGAGGATTTGTGTGTACTGTGGAAGCAGTTCTGGTAACAAAGCTAGTTACCAAGAAGCTGCTGTGGAACTAGGCGAGGAGATGGTTGAGAGAAGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGTTGATGGGTCTAGTTTCTCAGGCAGTTCATGATGGTGGACGCCATGTTCTGGGTGTTATCCCAAGAAGTCTCATGCCAATAGAGATAACTGGTGAGCCTATTGGTGAAGTGAGAGCAGTATCTGATATGCATCAAAGGAAAGCTGAGATGGCTCGTCAAGCTGATGCATTCATTGCCCTTCCTGGGGGATATGGAACCCTTGAAGAATTGCTTGAAATCATTACATGGGCTCAGCTTGGAATCCACAGCAAACCGGTGGGTCTGTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCCGTTGATGAAGGCTTTATTTCTCCAAAGGCACGTCGCATTATCGTGTCAGCCCCCACAGCCAAAGAACTGGTTAGAGAGCTAGAGGAACATGTACCTGAACGAGATGAGGTTGTATCCAAGTTGGTGTGGGAAGAAAGACTAAGTTATGTGCCTGAATCAGAAGTTGCCATGTGA 642 0.4611 MEETKSKFKRICVYCGSSSGNKASYQEAAVELGEEMVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRSLMPIEITGEPIGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKELVRELEEHVPERDEVVSKLVWEERLSYVPESEVAM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00100 213 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Phco6g00100 213 FunFam CASP-like protein 1 185 - -
Phco6g00100 213 Gene3D - 1 185 - -
Phco6g00100 213 PANTHER LOG FAMILY PROTEIN YJL055W 3 208 - -
Phco6g00100 213 SUPERFAMILY MCP/YpsA-like 7 186 - -
Phco6g00100 213 NCBIfam Rossman fold protein, TIGR00730 family 9 185 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00100 Phco-Chr6 989318 992847 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00100 6 989318 992847 Phco6g00100 6 989318 992847 ECH
Phco2g02234 2 53008911 53013130 Phco6g00100 6 989318 992847 PCT