Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01813 ATGGGCGCCGACGAAAGCGACAGCATGGCACAAGGATCATCTCCTATGCCAGAAAGCGAGAGCGTGGTTCGAGGTTCGGAGCAGGCGAAGGAGCTTAGGGAAGTTGTTGGGGGTTTGGGAAGTGAGGAGGGGTGTGGTGGGGTTGCTGTTAATGAGGATGGGTTTTCTGGCATTGAAAACCGAGGTTTGGGTGATGAAGGGGTTGTTAACGTTGTCAATAACAGTAATGTCTTGGAGGCTAAGGTTTCAGTTGTGAGTGGAAATGATTGTCAAGTTTTGACTGATTCTGAGGTGAATGGGATGTCCTCTTGGTTAGGAATGCAAGAAAGTGACATGAGCACGGTGTTTTCTAGTGATGGAGCTGAGAAGCTGGACTATGATTATGCATCTGAGAAGATGGACTATATGTTTGCTTCTGAGATGGAAGAGGCTGCTGTTTTGAGTTTGGATGGATCGGTAGGGGATGGTGGAGATCATGGAAGTGATGGAGGCAGGAGCAGCGAGGAAGAAAAATATGAAGATTGTGAGGCCGATAATGTCACTGTTGCTTCAGAGAGTAGAGTAGCAGAAGTTGCTGTTTTGAGTTTGGATGGATCGGTAGGGGATGGTGGAGAACATGGAAGTGATGGAGGCAGGAGCAGCGAGGAAGAAAAATATGAAGATTGTGATACCGATATTGTCTCTGTTGCTTCGGAGAGTAGAGTAGCTGAAGTTGCTGTTTTGAGTGGGGATAGTTTGGTAGGGGTTGGTGCTGAACACACAATAGATGGGAAGGAAAGTGAAGACTGTGATGGTTATGACAGAAGAGAAGAGGATATGAGCGAAGAGGAAGATAAAGATCCTGATGGGCACATTGTGCTTGGGGTTGATGGGCAAGGCAGAAGTGAAGAGGGAAGTAAAGATGAAGACTGTGATGGGAATGATGTGACTATTACTTCTGAGAGTAGGCCAGCAGAAGTTTCTGTCTTGATCGTGGATAGGTCCATAGGAGTTGGCAAGAAAGATGGAAGAGAAGAAGATATCAATGAAGAGGAAGGTGGAGATGGAAACTGTGATGGGAATGTTGTGACTATTACTTCTGCGAGTAGGATAGCAGAAGCTGCTGTTTCGAGTGTGGATACTCTTGGCAGGGAAGAAAGAAGAGAAGAGGATATCAGTGAGGAGGAAGGTGGAGGCAAAGACCGTGATGGGAATGTTGTGACTATTACTTCTGACAGTAGAGTAGCAGAAGCTGCTGTTTTGAGTCTGGATAGTTTTGTAGGAATTGGAGGGCAAGACAGAAAAGAAGAGGGTATACACGAAGAGGAAGGCAAGGATGAAGACTGTGATGGAGACATTGTTGCTGTTGCTTCTAAGAGTAAAGTTGCAGAAGCTGCTGCTTTGGGTGTGGATAGTTTGATAAATGTTGGTGGGGAAGATACAGCAGGTGAAGACTGTGATGGGAACGTTGTGACTCTTGCTTCTCAGAGTAAAGTTGCGGAAGCTACTGATTTTAGTGTGGATACTTTAGTAGGTCTTGGTGTGTTTGACAAAACAGTGGAGGAAGAATGTGAATACAGAGGAAAGAACGAAGAATTTGGTGGGAACATTGTGACTATTACTTCTGAGAATAGAGTAGCAGATGCGTCTGTTTTGAGTGTGGATGGTTCAGAAGTGGTTGGTGTTGAGGAAACAAAAGATGGGGGAGGAAGTGAAGAGGTAGAAAAAGACAAAGATTGTTCTGGGAACATTGTGACTATAGAAGTTCCAATTGTAGAGACAAGCGAGAATATGGATGTGGAAGTGGAGGACTTGAGTGAGGAAGGGTATGATTTTTCTGTTGGTGATTTTGTTTGGGGTCAAGGTGAGAGTCAACTTTGGTGGCCTGGCCGGATTTATGACCCATCTGATGCATCTGATGTTGCATTGAAGCTGAAACAAAAGAACAGACTTCTGGTTGCCTACTTTGGGCATGGAACCTTTGCGTGGTGTCATCCATCGCAGTTAAAGTCTTTTGAGGATAACTTTGATGATATGGTTAAACAGAGTAGCTGCATTGATTTTGTCAATGCTGTGCAAGAAGCTGCAAGAGAGGTCGGAAGGCTTCTGTCTATGAAGCTGAGTCGTTTAGTTGTTGACAAGAAAACAGGTTATGAATCTGCTCTCTTGTTGGGGAAAAATTCTGGAATCAAGGAAGGAGTTCTTGTGCCAGAAACTGGCATAGAGAGACTTTTATATAGTCAATTTGAGCCAGTAGAATTACTTTCTCATATGAATCAAATTGCGCGAATTGTTGATAGTGGTAGTAGTGTTATGGAGCTGGAGATCTTAAAGGCTCGACTTTCGGCATATTATCTGTCAAAAGGGCATCAATTACCTGATTTTATGGATACCCAGTTGGCTCCTGGAGTTGAAGATAGTGTAACGGATGAAACAGTTGCTGTAGAGAGCAGTAGAAGTACTGTGGAAGCCCCGAGCCAGGGACCATTTGATGAACTGGGTCATTCTCCAGGGCTTTCAGGGAACATATCAAACCATGTTAGAAAGCAGAAAAGCATGGCTGAAATTATGAGGGAGGACAAAGATGTTCATACGGCAAGTAGGGAGGTGGAGGCAACTGGCTCAAATGGTAGAAGGAAGAGAAAAGGTAATGAGGCTGGTATGAGATCTAAACCTGTTCAAAAGAAAAAAGAGTTGCTTCTGGACACTGATGAAGATGTGTCAAGTGCTGAACATTGTGCCGAGGAAAACAGTGGTAGCATTGGCTCATGGCTGCAGTCAAAGGAGAAGAAAGAAGTTTTAGATGAAGGGAGGAAGGGTAGTTTGTCTAGAGAAAGGAAGAAAAGTAAGTACTTGTCCCCACCTTTCACTACTCCAATCAGGGGACAAAGGGAGGAAAGTATTGAAGCAGAATCCCTTGAATCCAGAAAAGTTAAAGCATCACATACAAGCACAGTGGCTGCTGTCCTGCAATATCCTCCAGTTTATATGGGGAGGCTTTTTGATAGCTCAAATTACCAAACCGAAAATGATGGGAAAAAGGTTATTGATCCAAAGAAAATCCAGGCTCCTGTGGAAGAAGTTCTGTCCCAAGTCCGTAATGCAGCTATTAGTCCACAAATTCGTAGGGAAGGCATTTCTCTTGATCAATTTGTTGACTTCACTTTTGCCTTTAGAAGTTCATTATATTCTGAAGGATCGTTACGTGATGTATACGAGAAGAATCAGCCTGGAAGGAAAAGAAAGAGGCCAGAATCTGACGAAGAAGATGGAATGTTGAAAGATGCTCAAATATCATCACTGAAACAAAATTCTGGGCCAAAGAAGAAAAGAAAAGAAACTGCTTCAGGTAAGAAGGGGGGTGATGAAAATGCTCAAGGTGCGGTTCTTGTTGTTTCATTTTGGCAAGGAACATCCACGCCTTCAAGATCTGACCTTATCTCAGTGTATAGTAAGTTTGGAGCTCTGAATGAAGCAGAAACAGATGTGTTCAACAATAACTACACAGCTAGAGTGTCCTTCCTGAGAACTTTTGATGCTGAAAATGCATTGAACCATTCTAAAAACAATAACCCTTTTGGATCCGCTGATGTTACTTTTCAGCTCCAGTATCACTCTGACGGAGCAAAGTCTGAACAACATAATGAAAGATCAAAGAACAAACCTTTGGTAGCAGCTAAATCACCATCGGTTTCACTCTCACAGGGTGGTGAAGCATCCAGATTGATCTTTATCCAGAAGAAGCTTCAAGGTCTGACTTTGGTACTTGAAGCATCAGGTGACAAATCTCCCGATTTGATGGCTAAACTACAGAGGGAGGTGAAGGCTCTTCTGGAGGATGTCAACCAAATGGTTGAAGCTTCTCTGTTTTAG 3852 0.4356 MGADESDSMAQGSSPMPESESVVRGSEQAKELREVVGGLGSEEGCGGVAVNEDGFSGIENRGLGDEGVVNVVNNSNVLEAKVSVVSGNDCQVLTDSEVNGMSSWLGMQESDMSTVFSSDGAEKLDYDYASEKMDYMFASEMEEAAVLSLDGSVGDGGDHGSDGGRSSEEEKYEDCEADNVTVASESRVAEVAVLSLDGSVGDGGEHGSDGGRSSEEEKYEDCDTDIVSVASESRVAEVAVLSGDSLVGVGAEHTIDGKESEDCDGYDRREEDMSEEEDKDPDGHIVLGVDGQGRSEEGSKDEDCDGNDVTITSESRPAEVSVLIVDRSIGVGKKDGREEDINEEEGGDGNCDGNVVTITSASRIAEAAVSSVDTLGREERREEDISEEEGGGKDRDGNVVTITSDSRVAEAAVLSLDSFVGIGGQDRKEEGIHEEEGKDEDCDGDIVAVASKSKVAEAAALGVDSLINVGGEDTAGEDCDGNVVTLASQSKVAEATDFSVDTLVGLGVFDKTVEEECEYRGKNEEFGGNIVTITSENRVADASVLSVDGSEVVGVEETKDGGGSEEVEKDKDCSGNIVTIEVPIVETSENMDVEVEDLSEEGYDFSVGDFVWGQGESQLWWPGRIYDPSDASDVALKLKQKNRLLVAYFGHGTFAWCHPSQLKSFEDNFDDMVKQSSCIDFVNAVQEAAREVGRLLSMKLSRLVVDKKTGYESALLLGKNSGIKEGVLVPETGIERLLYSQFEPVELLSHMNQIARIVDSGSSVMELEILKARLSAYYLSKGHQLPDFMDTQLAPGVEDSVTDETVAVESSRSTVEAPSQGPFDELGHSPGLSGNISNHVRKQKSMAEIMREDKDVHTASREVEATGSNGRRKRKGNEAGMRSKPVQKKKELLLDTDEDVSSAEHCAEENSGSIGSWLQSKEKKEVLDEGRKGSLSRERKKSKYLSPPFTTPIRGQREESIEAESLESRKVKASHTSTVAAVLQYPPVYMGRLFDSSNYQTENDGKKVIDPKKIQAPVEEVLSQVRNAAISPQIRREGISLDQFVDFTFAFRSSLYSEGSLRDVYEKNQPGRKRKRPESDEEDGMLKDAQISSLKQNSGPKKKRKETASGKKGGDENAQGAVLVVSFWQGTSTPSRSDLISVYSKFGALNEAETDVFNNNYTARVSFLRTFDAENALNHSKNNNPFGSADVTFQLQYHSDGAKSEQHNERSKNKPLVAAKSPSVSLSQGGEASRLIFIQKKLQGLTLVLEASGDKSPDLMAKLQREVKALLEDVNQMVEASLF 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01813 1283 ProSiteProfiles PWWP domain profile. 607 668 IPR000313 -
Phco5g01813 1283 PANTHER ALDOLASE-RELATED 260 1220 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 332 353 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 161 178 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 1 33 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 208 222 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 810 838 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 852 905 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 1199 1223 - -
Phco5g01813 1283 Pfam PWWP domain 608 691 IPR000313 -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 150 178 - -
Phco5g01813 1283 CDD PWWP 608 691 - -
Phco5g01813 1283 SMART PWWP_4 605 666 IPR000313 -
Phco5g01813 1283 Gene3D - 595 700 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 195 222 - -
Phco5g01813 1283 Coils Coil 1260 1280 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 1066 1116 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 921 944 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 373 395 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 369 398 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 251 318 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 1066 1088 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 7 21 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 852 952 - -
Phco5g01813 1283 MobiDBLite consensus disorder prediction 294 309 - -
Phco5g01813 1283 SUPERFAMILY Tudor/PWWP/MBT 601 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01813 Phco-Chr5 54252714 54256565 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01813 5 54252714 54256565 Phco5g01813 5 54252714 54256565 ECH