Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01525 ATGTTTAGTAGCAGACTCTATCACTTTTGTGTGGCAACCATTTTATGCATCTTTTTATGCCATGCAAGTTTCCATGCAGAGATGTGTGCGGAGACAGAGAAGCAAGCTCTTCTCAAGTTAAAGGAAGGTTTTGTTCATGAAATGGAGCTTCTATCCTCCTGGAACGGTGATGATTGTTGCAAATGGAAAGGAGTTTCATGCAATAATTTAACAGGTCATGTAACCTCACTTGATCTTAGATTTTCAAATTTTACAATAGTTGAAGATTTAAACTATCTTCTAGACACAATGCCAGTGATGGAATTTTTCAGTGGCACTACAGCATTGGGAGGTATGATAGATTCTTCAATATGTGAACTGCAGCATCTCACTTTCTTAGATCTCAGTCACAATGACTTAGTGGGAGAGATCCCAAAATGCATTGGTTCACTTGGTCAATTGACACAGTTAAAACTTGCATGGAATGGTCTTAATTCCGTCTCAGATGCTTTGTCAAATCTTTCCAATTTGCAATATCTTGACCTTAGGAAAAATGATTTTGTTGCAAGTGACCTTGATTGGCTTTCTCACCTTTCTACTTTGAGATACCTTGATCTTTCAAATAACAATCTTGGTGCAGTTATTGATTGGCCATCATCAATAAGTAAAATCCCTTTTCTATCTGAACTCTATTTAAATGACTGTGGACTCCCTCAAGTCAATCCTCAATCAATGTCTCACATCAATTCTTCCACTTTCCTCCAAATCCTCAGTCTATCAGGAAATAATTTTGACTCTTCAATTCTGTCATGGGTGTTGAATGTTAGCAAAGTCCTCACAGTTCTTGATCTCTCACATAATGAACTTGATGGTAGCATAATAAAGTCCTTTAACTCTTTGTGTCAACTTAAGAAGTTGTACCTGGGTTCCAATAAATTGTCTGATCAACTCAGTGATTACTTACGAGAATTGTGTTCTGCAAAAGATTTAGAGGTGTTGAATCTAGACCACAACCCATTTGTTAATGGGTCACTTCCTGATTTTTCACTGTTTTCATCCTTGGAAAGACTATCACTTCAACATACCAGTATTGTTGGGCCATTATCATTTGGTCACTTGCCTCGTCTTAAGGCTTTGGATCTTAGTTTAAACAATTTGAGTGGATCATTGCCTGTATTCGAGGTTACTAAATTTTCCTCATTGCATTTTTTGGATCTTTCACACAACAAATTGAGTGGGACACTCCCATCTACTATTGGACAACTTTCTAATCTCTGGTTTTTGTCCATCTCCTCGAATGAGTTGAATGGGAACATTAGAGAAGAGCATTTATTGAAACTATCTGAATTGAAGATATTTGATGTGAGTCAAAATTCTCTTTCATTTAACTTGAATTCAGATTGGGTTCCACCTTTCCAATTGGTGGCATTGTATGCATCATCCTGCATTTTGGGGCCTCAATTTCCAATGTGGCTTAAACAGCAAAGGAAACTTCAGGTGTTGCAAATCTCTAATACCCACATTATGGATTTATTTCCTGAATGGTTTGGGGACATATCATCAAGTTTGTTATACGTAAATGTTTCCCATAATAAACTTAGTGGAGTCTTGCCAAAATCATTATCAGGTATTAAAACAGGGATTATGAGTACATGGGATTTTAGTTTCAACAATTTATCTGGCCCATTGCCTCCTTTTCCTCCAAAAGTATATGAACTCTTTCTCTCAAATAATATGTTCACAGGGTTTGTATCCTCCTTTTGTGAAACATCCCCACTGTCTGTAACTTATCTTGACCTCTCTAGTAACGCACTCACAGGCCCCCTTCCAAATTGTTGGCAGAAATTTCAAAATTTGGAGGTTCTGAATTTGGCAAATAACAGTTTATCAGGGAGAGTGCCAGAGTCATTTGGCAATTTACAAAGTATTTCGTCGATGCATCTAAATAGCAATAACTTCTCTGGTGAGATTCCATCTCTGACTCTTTGTAAAAGAAGCTTCAGATTCGTTGATTTTGGGGATAATAATCTTGAAGGAACATTAAAAACATTGTTAGAGTTGGATCATTTGGTTGTACTGCGTCTACGAGGTAACAGGATCCGAGGAAGCATACCCACAAGTCTATGTAACATATTATCTCTTAAAGTATTGGATCTCTCATCAAACAATATTACAGGAGAAATACCACAATGCATCGGTCACATAAGTGCGATGTCAGATAGGGAATTTCGACGTGAAACCATTTTGTATGGAACGTCTGCACCTTTAATATTTCACGATAGTGGAATTGGACATTTTATTGATGAAATATCATTGACATGGAAAGGAAGAAACTATGAACTGGGGAGAGTTCTTGGACTTTTAAAAGCCATTGATATTTCTAATAACCATTTAACAGGAGAGATACCGCAAAGTATAACATCACTAGTGGGTTTAATAGCCTTAAATCTTTCAAGAAATAATCTTACAGGATTCATTCCCGACAACTTTGGTCGTTTGGAGAGGTTGGATTCACTTGACTTATCAAGAAACCATCTTGATGGCAGAATCCCAACAAGCTTTTCAAATATTTCTCTCACTTACATGGACTTGTCTTTCAACAACTTATCAGGATTGATTCCGCTAAGCGCCGAACTACAAAGCTTTGATGTCTCTTCTTATGTTGGGAACATTGGGCTTTGTGGCTCACCACTTGAAAACCAATGCCCAGTAGAAGGGATTCCACCAAGAGGAAGAGTTGAAATAAATGACGATGAATTAGGGTTTTATATCGGCCGGTGGTTGGGATTTTGTGTTGGATTTTGGAGTGTTTGTGGAACTCTAATGGTAAAAAGTTCATGGAGACGTGCTTATTTTCAGTTGTTCATCACCGTAACTGATTGGATGTATGTGACAGTTGTTATCTTTACAGCCAGAATGAAAAGAAAATTCAGAAGTTAA 2919 0.3731 MFSSRLYHFCVATILCIFLCHASFHAEMCAETEKQALLKLKEGFVHEMELLSSWNGDDCCKWKGVSCNNLTGHVTSLDLRFSNFTIVEDLNYLLDTMPVMEFFSGTTALGGMIDSSICELQHLTFLDLSHNDLVGEIPKCIGSLGQLTQLKLAWNGLNSVSDALSNLSNLQYLDLRKNDFVASDLDWLSHLSTLRYLDLSNNNLGAVIDWPSSISKIPFLSELYLNDCGLPQVNPQSMSHINSSTFLQILSLSGNNFDSSILSWVLNVSKVLTVLDLSHNELDGSIIKSFNSLCQLKKLYLGSNKLSDQLSDYLRELCSAKDLEVLNLDHNPFVNGSLPDFSLFSSLERLSLQHTSIVGPLSFGHLPRLKALDLSLNNLSGSLPVFEVTKFSSLHFLDLSHNKLSGTLPSTIGQLSNLWFLSISSNELNGNIREEHLLKLSELKIFDVSQNSLSFNLNSDWVPPFQLVALYASSCILGPQFPMWLKQQRKLQVLQISNTHIMDLFPEWFGDISSSLLYVNVSHNKLSGVLPKSLSGIKTGIMSTWDFSFNNLSGPLPPFPPKVYELFLSNNMFTGFVSSFCETSPLSVTYLDLSSNALTGPLPNCWQKFQNLEVLNLANNSLSGRVPESFGNLQSISSMHLNSNNFSGEIPSLTLCKRSFRFVDFGDNNLEGTLKTLLELDHLVVLRLRGNRIRGSIPTSLCNILSLKVLDLSSNNITGEIPQCIGHISAMSDREFRRETILYGTSAPLIFHDSGIGHFIDEISLTWKGRNYELGRVLGLLKAIDISNNHLTGEIPQSITSLVGLIALNLSRNNLTGFIPDNFGRLERLDSLDLSRNHLDGRIPTSFSNISLTYMDLSFNNLSGLIPLSAELQSFDVSSYVGNIGLCGSPLENQCPVEGIPPRGRVEINDDELGFYIGRWLGFCVGFWSVCGTLMVKSSWRRAYFQLFITVTDWMYVTVVIFTARMKRKFRS 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01525 972 Gene3D Ribonuclease Inhibitor 29 239 IPR032675 -
Phco5g01525 972 PRINTS Leucine-rich repeat signature 826 839 - -
Phco5g01525 972 PRINTS Leucine-rich repeat signature 394 407 - -
Phco5g01525 972 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 581 674 - -
Phco5g01525 972 SMART LRR_typ_2 366 388 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 191 213 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 680 703 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 167 190 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 293 317 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 144 166 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 802 825 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 120 143 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 826 849 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 391 415 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 704 728 IPR003591 -
Phco5g01525 972 SMART LRR_typ_2 609 632 IPR003591 -
Phco5g01525 972 SMART LRR_sd22_2 826 852 - -
Phco5g01525 972 SMART LRR_sd22_2 293 316 - -
Phco5g01525 972 SMART LRR_sd22_2 269 292 - -
Phco5g01525 972 SMART LRR_sd22_2 680 706 - -
Phco5g01525 972 SMART LRR_sd22_2 440 459 - -
Phco5g01525 972 SMART LRR_sd22_2 585 614 - -
Phco5g01525 972 SMART LRR_sd22_2 120 146 - -
Phco5g01525 972 SMART LRR_sd22_2 191 219 - -
Phco5g01525 972 SMART LRR_sd22_2 391 417 - -
Phco5g01525 972 SMART LRR_sd22_2 167 187 - -
Phco5g01525 972 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 362 730 - -
Phco5g01525 972 Gene3D Ribonuclease Inhibitor 240 558 IPR032675 -
Phco5g01525 972 SUPERFAMILY L domain-like 28 335 - -
Phco5g01525 972 SUPERFAMILY RNI-like 272 534 - -
Phco5g01525 972 Gene3D Ribonuclease Inhibitor 559 899 IPR032675 -
Phco5g01525 972 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 772 895 - -
Phco5g01525 972 Pfam Leucine rich repeat 781 839 IPR001611 GO:0005515
Phco5g01525 972 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Phco5g01525 972 Pfam Leucine rich repeat 588 646 IPR001611 GO:0005515
Phco5g01525 972 SUPERFAMILY RNI-like 561 868 - -
Phco5g01525 972 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Phco5g01525 972 Pfam Leucine Rich repeat 706 720 IPR001611 GO:0005515
Phco5g01525 972 Pfam Leucine Rich repeat 121 133 IPR001611 GO:0005515
Phco5g01525 972 Pfam Leucine Rich repeat 271 289 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01525 Phco-Chr5 51066947 51069865 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01525 5 51066947 51069865 Phco5g01525 5 51066947 51069865 ECH