Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01426 ATGGGGCACAAGAACACAGTTTTCTTGGCACTGATTGCTACCATGATTGCAAAGGAGGTCTTTGCAACACAACATGTAGTTGGTGGAAGCCAAGGCTGGGATCAATCCACAGACTTTAATTCATGGACTTCAGGCCAAACATTCAAGGTTGGAGATAAACTTGTTTTCAAGTACAGTTCTTTGCATAGTGTGGTTGAACTGGGCAAAGAGAGTGCCTACAAGAATTGTGATATTAGCAGTCCAATCCAATCTTTGAGTAATGGCAATGATGTTGTGAAATTGGACAAACCAGGTACAAGGTACTTCACTTGTGGTACCTTGGGCCACTGTAGTCAAGGGATGAAGATGAAAATTACCATTGTTAAAGGGAATGCTCCTTCTCCTGCATCATCACCATCATCTTCCTTATCATCACCATCTTCTTCTCCTGCTACCACTGATACATCTTCAACTGATACATCTTCAGGCTCACAATGCTTCACCTCTTTTATGTTCATTGTTGCATTATCTCTCACTGTAATGGTTTCACTGTTTTAA 537 0.4115 MGHKNTVFLALIATMIAKEVFATQHVVGGSQGWDQSTDFNSWTSGQTFKVGDKLVFKYSSLHSVVELGKESAYKNCDISSPIQSLSNGNDVVKLDKPGTRYFTCGTLGHCSQGMKMKITIVKGNAPSPASSPSSSLSSPSSSPATTDTSSTDTSSGSQCFTSFMFIVALSLTVMVSLF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01426 178 SUPERFAMILY Cupredoxins 21 120 IPR008972 -
Phco5g01426 178 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Phco5g01426 178 MobiDBLite consensus disorder prediction 124 156 - -
Phco5g01426 178 PANTHER BLUE COPPER PROTEIN 21 136 IPR039391 GO:0009055
Phco5g01426 178 CDD Phytocyanin 23 120 - -
Phco5g01426 178 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
Phco5g01426 178 Gene3D - 21 126 IPR008972 -
Phco5g01426 178 MobiDBLite consensus disorder prediction 122 156 - -
Phco5g01426 178 FunFam Blue copper 21 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01426 Phco-Chr5 49688811 49691136 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01426 5 49688811 49691136 Phco2g01068 2 16547353 16547975 PCT