Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01190 ATGATTCTCATGAGTTGCCATTTGATTCTGAAACGTTGTTTCTATTCTCTCTCTTTCTACCACTCTGCTACCCATTCTCTCTCTCTTGCACTTCAGCACTGCCAAGTGCTACTCTCTTGCCCTCAATTGTATAACACAGCTGGAATCTGCCTTTCTTGTGCTTTCTTCATAATGGGAAGGAGTTTGAGTCCAATGCTCCAAAGAGAGATTCAAAATCTTGACAACAAAGATGCAGATAGCCGCAAATCTGCAATCAGAGCATTGAAGTCATATGTGAAAGATCTGGACATGAAGACAATTCCTATCTTTCTTGCTCAAGTTTCCGAGACCAAGGAAACTGGTTCTTTGTCCGGAGAATTCACAATTTCACTGTACGAGGTTCTTGCTCGGGTTCATGGAGTGAAGATTGTTCCCATGATAGACAGTATTATGCAATCCATAATTCAGACCTTAGCTTCAAGTGCAGGTTCCTTTCATCTTCAGCAGGCGTGCTCAAAGGTGGTTCCAGCCATAGCAAGGTATGCAATTGATCCCACAACCCTAGAAGAGAAGAAGAGGCAAATAATTCACTCTCTTTGTAAGCCCCTTTCAGACTCTCTCTCAAGTTCTCAAGAGAGTTTGACATGTGGTGCAGCCCTTTGCTTGAAGGCTCTTGTGGATTCAGATAACTGGCGTTTTGCTTCAGATGAGATGGTTAATAGGGTTTGCCAGAATGTTGCTGCGGCATTGGAGGGAAAGTCTACTCAAACCAATTCACACATGGATCTTGTTATGACCCTGGCGAAGCATAATGCTTTGACTGTTGAAGCCTATGCTAGATTGCTCATACAATCTGGATTGCGAATACTAAATGCTGGGAGTGAGCCTTTGGAGGTAAATTCTCACAAGCGGTTTGTAGCCATTCAAATGGTGAACTTCTTGATGAAATGTCTAGATCCCAGGAGCATATTTTCGGAGGTTGAACAGATAATTGAGGTGATGGAGCTGTCTCAATCAGACAAAATGGCATATGTCAAAGGAGCTGCATTTGAGGCTTTGCAAACTGCGAAGATGATTTTGAATGATAAAAAATCAAGAGGTGTGAAGACTCCTGCTTCTGCGAGGGGTTCAAATTTCAGTAGGAAGGACATTATGGAGGGAGAAAGTTTTTCTGGTGATGGAGATTGTTCTCTATCGTCTATTTCCCCTGACTCACATACCAGTACCTTGGACTTCTTCAATGGATATGCATCCCCTGATGGGTCTCCCATTTTAACTAGCCTGCCTTCTCAGAACTTCTACGAGCAAAGGAGTGTGAATAGGAAGCTTTGGAGTCTTGAAAATGGAGAGGTTGATGTGTCTCTTAAGGATGGTTTGTTCTCAAAGTTAGGACATGGAAATGCCTCTTTGGAGCACACTATGGATTATGAATTTTCTAATGGAGGGGGAGATTTAACAGGAGAGTTTACTGGTTTCCCGCACAGAAGTCCTTGGCGTGGAGCGTCTAGAAGTGCCAGCACAAGCCCTCGAAAATCCCTCACGCAGGACAACTTCAAAATTTTTATGACTCCTAGAAAGCTCATTCACTCTCTTCAAGATCCAAATGATGAGATTTCAGATTGCTCTGAGAAACCGAATAGAAGGATCAAGAGTCTATCATCAGGCAATATTATGTGGAGTCCAGCATCCTTGTCAAAATATGATCAAAATATTGCAGATCATGTCAACTATGATTCTAAAGAGAGTGGTGGCTTATATGGTGATGATAAGTTCCAAGGTGGACCGGAGTCAGTCTCATCAACAGATGACAATACTGTTACCTCTGATATGGTGATGCCGTCCGAGGTTGGTCCTGAAAGTGGAAATGGTACTGAAACAGTTCTCACGGGAAAGCCATTTCAAAAGACTAAGCAAAAATTAGTTTGTGGCATTTCTTTTGCTCTCCTTGCAATAGCAACTCCTTTACTCTGGATCAACAGTCAGGATGAAGGCCATTTTCTTGTCCCTACATAA 1992 0.4257 MILMSCHLILKRCFYSLSFYHSATHSLSLALQHCQVLLSCPQLYNTAGICLSCAFFIMGRSLSPMLQREIQNLDNKDADSRKSAIRALKSYVKDLDMKTIPIFLAQVSETKETGSLSGEFTISLYEVLARVHGVKIVPMIDSIMQSIIQTLASSAGSFHLQQACSKVVPAIARYAIDPTTLEEKKRQIIHSLCKPLSDSLSSSQESLTCGAALCLKALVDSDNWRFASDEMVNRVCQNVAAALEGKSTQTNSHMDLVMTLAKHNALTVEAYARLLIQSGLRILNAGSEPLEVNSHKRFVAIQMVNFLMKCLDPRSIFSEVEQIIEVMELSQSDKMAYVKGAAFEALQTAKMILNDKKSRGVKTPASARGSNFSRKDIMEGESFSGDGDCSLSSISPDSHTSTLDFFNGYASPDGSPILTSLPSQNFYEQRSVNRKLWSLENGEVDVSLKDGLFSKLGHGNASLEHTMDYEFSNGGGDLTGEFTGFPHRSPWRGASRSASTSPRKSLTQDNFKIFMTPRKLIHSLQDPNDEISDCSEKPNRRIKSLSSGNIMWSPASLSKYDQNIADHVNYDSKESGGLYGDDKFQGGPESVSSTDDNTVTSDMVMPSEVGPESGNGTETVLTGKPFQKTKQKLVCGISFALLAIATPLLWINSQDEGHFLVPT 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01190 663 MobiDBLite consensus disorder prediction 576 599 - -
Phco5g01190 663 FunFam protein SINE1 isoform X1 59 374 - -
Phco5g01190 663 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 60 512 IPR033337 GO:0005874|GO:0008017
Phco5g01190 663 SUPERFAMILY ARM repeat 60 349 IPR016024 -
Phco5g01190 663 Gene3D - 60 359 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01190 Phco-Chr5 45411275 45415968 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01190 2 37907703 37912052 Phco5g01190 5 45411275 45415968 PCT