Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01108 ATGGAACCTTCTTCCTCTTCGCTTCAGGTGGAAACTGGAGAACGGCAACAACCTAGTCCACTCCGAAAAATGTTTGCTGTCTCTTCCATAGCTGCAGGAATCCAATTTGGGTGGGCCCTGCAACTCTCTCTCTTGACACCCTACGTTCAAACGTTGGGAGTCCCTCATGCGTGGTCCTCCTTCATCTGGCTCTGTGGTCCCATCTCTGGGTTGGTTGTCCAGCCCATTGTAGGCTACAGCAGCGATCGATGCACTTCCCGTTTTGGTCGCCGCCGTCCCTTCATTCTGAGTGGGGCTGTTGCCGTCGCCATCTCCGTGTTCCTCATTGGCTATGCGGCTGATATAGGACACGCCACCGGTGACGATATAACCAAAAAGACCCGTCCACGAGCGGTGGCCATATTCGTGGTTGGGTTTTGGATCCTGGATGTTGCTAACAACATGCTCCAGGGTCCATGCCGTGCTTTTCTCGGGGATCTTGCCGCCGGAGATCAGAAAAAGACTAGAACCGCCAACGCCTTTTATTCGTTCTTCATGGCCATCGGCAACGTTTTGGGCTACGCCGCTGGCTCCAATGATAAACTCCACCACCTTTTCCGGTTCACGGAAACCAAGGCGTGTGGCGTGTTTTGTGCCAACCTTAAAAGTTGTTTTTTCTTCTCAATAGTGCTCCTCCTTGTCCTTTGTGCCATTGTTCTCACTTGCGTGGACGATCCACAACTCACACCAGATTGTGTCAACGCTAACAACAATGCATACAACAACCTTCAAAGTGGATCGTGGCATTCATGTTTCGGTGAATTGGGTATTGCGTTTAAGGGATTACAAAAGCCAATGTTGATGTTGATGCTTGTGACTGCCATTAACTGGGTCGCATGGTTCCCTTATGTGTTGTACGACACTGATTGGATGGGTCGAGAGGTGTACGGTGGTGAGGTGGGCAGTAAAGCATACGATGCTGGTGTGCATGCAGGTTCCTTGGGGCTTATGTTGAACTCAGTGGTTTTGGCTCTGATGTCGTTGGTGGTGGAACCGTTGGGTCGTGTTGTCGGAGGAGTTAAGTGGCTCTGGGCAGTCGTTAATGTTATTCTCGCCGTTTGCATGGCGATGACGGTGGTGATCACAAAGGCTGCGCGCCACGAACGGAATCATGACGGCGTCCGCGTTGGCTATCCTTCGTTCGGTGTCAAAGCTGGGGCATTGAGTTTCTTCTCTGTCCTCGGAATCCCTCTTGCGATTACTTACAGTGTTCCATTTGCTCTGGCATCTATATACTCCAGCACTTCAGGTGCAGGCCAAGGTCTATCTTTGGGTCTTCTCAATGTTGCAATTGTCGTGCCCCAGATGATAGTTTCAGCAATAAGTGGACCATGGGATTCTTGGTTTGGTGGCGGTAACTTGCCGGCGTTTGTGTTAGGTGCGGTGGCGGCAGCCGTGAGTGCGGTGTTAGCGGTTGTTATGCTGCCATCTCCAAAGCCAGCAGATGTGAGCAAAGCTTCTTCCGTCACCGTAGGGAATTTCCATTAG 1527 0.5134 MEPSSSSLQVETGERQQPSPLRKMFAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWSSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFILSGAVAVAISVFLIGYAADIGHATGDDITKKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANAFYSFFMAIGNVLGYAAGSNDKLHHLFRFTETKACGVFCANLKSCFFFSIVLLLVLCAIVLTCVDDPQLTPDCVNANNNAYNNLQSGSWHSCFGELGIAFKGLQKPMLMLMLVTAINWVAWFPYVLYDTDWMGREVYGGEVGSKAYDAGVHAGSLGLMLNSVVLALMSLVVEPLGRVVGGVKWLWAVVNVILAVCMAMTVVITKAARHERNHDGVRVGYPSFGVKAGALSFFSVLGIPLAITYSVPFALASIYSSTSGAGQGLSLGLLNVAIVVPQMIVSAISGPWDSWFGGGNLPAFVLGAVAAAVSAVLAVVMLPSPKPADVSKASSVTVGNFH 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01108 508 NCBIfam sucrose/proton symporter 20 492 IPR005989 GO:0005886|GO:0008515|GO:0015770
Phco5g01108 508 FunFam Sucrose transport protein 18 488 - -
Phco5g01108 508 PANTHER SUGAR TRANSPORTER 20 487 - -
Phco5g01108 508 SUPERFAMILY MFS general substrate transporter 22 493 IPR036259 -
Phco5g01108 508 Pfam MFS/sugar transport protein 25 189 - -
Phco5g01108 508 CDD MFS_SLC45_SUC 24 470 - -
Phco5g01108 508 Gene3D MFS general substrate transporter like domains 16 491 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01108 Phco-Chr5 42363814 42366518 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01108 5 42363814 42366518 Phco5g01108 5 42363814 42366518 ECH