Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01107 ATGGTGGCGGTCTCATCCATCGCCGCTGGTATCCAATTTGGATGGGCCCTGCAACTCTCCCTTCTAACGCCATACGTACAAACCCTAGGAGTTCCTCACGCCTGGGCCTCTTTCATCTGGCTCTGTGGCCCCATCTCCGGCCTCTTAGTTCAGCCCATTGTAGGCTATAGCAGTGACCGATGCCAGTCTGCTTTCGGCCGCCGCCGTCCCTTTATCCTCGCCGGCGCGCTCGCCGTCGCCATCGCTATTATCCTAATTGGCTACGCTGCCGATATAGGACAGCTAGCTGGCGATGACATCACCCAGAAAACCCGTCCACGTGCCGTTGCAATCTTCGTCGTCGGCTTCTGGATCTTAGATGTTGCCAACAACATGCTCCAGGGTCCATGCCGCGCCTTCCTTGGTGACTTGGCTGCCGGCGACCAGAAAAAGACGAGAACCGCTAACTCGTTCTTCTCGTTTTTCATGGCTGTCGGCAACGTCTTGGGCTATGCCGCAGGATCCTACGACGGTCTCCATAAGATCTTCCCTTTCACAGAAACCGAGGCATGCAACGTCTTCTGCGCAAACTTAAAGAGCTGCTTCTTCTTCTCCATCGTTCTTCTTCTTGCTTTGTGCATTATCGTTCTCACTTGCGTGAACGACCCTCAGTATATACCGTCAAATCCAGAGAAGGAGGCTGAGGAGGCAGGGAAGACGCAGGTTTCGTGCTTCATGGGAGAGGTTTGCGTTGCATTCAAGGGACTGCAGAAGCCAATGTGGATGCTGATGTTGGTGACTGCAATTAACTGGGTTGCGTGGTTCCCTTATGTTTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTATGGCGGTGATATTGGGCAGAAGGCATATGATGCTGGTGTTCATGCAGGTTCTTTGGGGCTCATGTTGAATTCAGTGGTGTTGGCTGTGATGTCTTTGGGTGTAGAACCTTTGGGTCGCTTGGTTGGGGGAGTGAAGTGGTTGTGGGCAATTGTTAATGTTATTCTTGCAGCTTGCATGGCACTGACCGTGCTCATCACAAAAGTCGCTGAGCAGCAACGAGCACTTAACCCTGCTCTCATTGGAAACCCAAGCATGGAAGTGAAAGGTGGAGCCATGGCATTCTTCTCCGTCCTTGGTATTCCTCTTGCGATTACGTATAGTGTTCCCTTTGCTCTAGCATCTATCTACTCCAGCAGCTCAGGATCAGGACAAGGTTTATCTTTGGGTCTTCTCAATGTTTCAATTGTGATTCCTCAGATGATTGTATCAGCAATTAGTGGACCATGGGATGCTTGGTTCGGTGGTGGCAACTTGCCGGCTTTTGTGTTGGGCGCGGTGGCTGCCGCCTTAAGTGCCGTACTTGCAGTTATTCTACTTCCAAGCCCCAAGAAAGAAGATGAAGCCAAGATTTCCAGCCTCTCCATGGGGAGTTTTCATTAA 1449 0.5155 MVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCQSAFGRRRPFILAGALAVAIAIILIGYAADIGQLAGDDITQKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANSFFSFFMAVGNVLGYAAGSYDGLHKIFPFTETEACNVFCANLKSCFFFSIVLLLALCIIVLTCVNDPQYIPSNPEKEAEEAGKTQVSCFMGEVCVAFKGLQKPMWMLMLVTAINWVAWFPYVLFDTDWMGREVYGGDIGQKAYDAGVHAGSLGLMLNSVVLAVMSLGVEPLGRLVGGVKWLWAIVNVILAACMALTVLITKVAEQQRALNPALIGNPSMEVKGGAMAFFSVLGIPLAITYSVPFALASIYSSSSGSGQGLSLGLLNVSIVIPQMIVSAISGPWDAWFGGGNLPAFVLGAVAAALSAVLAVILLPSPKKEDEAKISSLSMGSFH 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01107 482 FunFam Sucrose transport protein 1 462 - -
Phco5g01107 482 Gene3D MFS general substrate transporter like domains 1 463 IPR036259 -
Phco5g01107 482 SUPERFAMILY MFS general substrate transporter 4 469 IPR036259 -
Phco5g01107 482 PANTHER SUGAR TRANSPORTER 1 461 - -
Phco5g01107 482 CDD MFS_SLC45_SUC 1 445 - -
Phco5g01107 482 Pfam MFS/sugar transport protein 13 266 - -
Phco5g01107 482 NCBIfam sucrose/proton symporter 1 467 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01107 Phco-Chr5 42180670 42182501 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01107 5 42180670 42182501 Phco5g01107 5 42180670 42182501 ECH