Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01098 ATGGGAGAAAACAAAGATCAGGATTTCTTGTCCCACAAATTTCCCACAATCTCTCAGGTGGTGGAAGAGATGAAGGAGCTGTGGGGCATGGCTCTACCTATCACAGCTATGAATATGTTGGTGTTTGTGAGGGCAGTGGTTTCTGTTCTCTTCTTGGGTAGGCTTGGAAGCCTAGAGCTAGCAGGTGGTGCACTTTCCATAGGCTTCACCAACATAACAGGGTACTCTGTTCTTGTGGGTCTTGCAGCAGGCCTAGAACCTGTGTGCAGCCAAGCCTATGGTTGCAAAAACTGGGACCTCCTCTCTCTTTCTCTCCAACGCATGGTCCTCATCCTTCTCATGGCAATCATCCCCATAAGTCTTCTCTGGCTGAACCTTGAGAGGATCATGCTGTTCATGGGCCAAGACAGTGCCATAACAGGAATGGCATCACTCTACTGTTTCTACTCTCTACCAGACCTTTTAACAAACACCTTGCTTCAACCTTTAAGGGTTTTTTTAAGGTCCCAAAAGGTGACCAAACCTATGATGTATTGCTCCCTTGTAGCAGTGTTGTTCCATGTGCCACTGAACTACCTGTTGGTGGTTGTGATGGAGCTGGGGGTGCCGGGGGTGGCCATGGCTTCAGTCCTGACCAATCTGAACATGGTGGTGCTTATGGCAGGGTATGTGTGTCTGTGCAGGAAGAGGGAGATGGTGTTTAAGTGGGGATATGGAGGGGGAGTGGTGGCTGGGTTGTGTTCTGGGTTGGGGCAGTTGATGGAGTTTGCTGTGCCTAGTTGCCTTATGATATGTTTAGAGTGGTGGTGGTACGAGATTGTAACTGTGCTGGCTGGGTACTTGCCACGTCCAACACTAGCTGTGGCTGCCACTGGTATTCTGATTCAGACAACTAGCATGATGTACACTGTCCCCATGGCACTTGCAGGGTGTGTTTCTGCTAGGGTAGGGAATGAGCTTGGAGCTGGGAAACCATACAAGGCAAAGCTAGCAGCAATGGTTGCCTTAGGATGTGCATTTGTGATAGGCTTCATCAATGTGATATGGACTGTGATATTAGGTCAAAGATGGGCCGGGCTTTTCACCAGTGATGAGCCTGTCAAAGTCTTGGTTGCCTCAGTGATGCCAATTATGGGTCTGTGTGAGCTTGGGAACTGCCCACAAACCACAGGCTGTGGGATCCTGCGGGGTACGGCACGGCCTGGTGTGGGGGCCAATATAAATCTGGGCTCATTCTACTTTGTCGGTACTCCTGTGGCAGTGGGCCTGGCATTTTGGTTCAAGGTTGGGTTCAGTGGGCTTTGGTTTGGGCTTCTGTCAGCCCAGGTGACCTGTGCAGTGTCAATCATGTATGTGGTGTTGGTGAAGACTGATTGGGAAGCTGAGGCCCTGAAGGCTGAAAAACTCACAAGGGTGGAGATGAGTAGTTGCAATGGGCTTAGGAGTAAGGAGAATGAGAAAAATGAAGAAATGAGAGGGTTGTTGGGAAATGGGAACAAGAAAGATGACATTTGCTAA 1518 0.4954 MGENKDQDFLSHKFPTISQVVEEMKELWGMALPITAMNMLVFVRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLAAGLEPVCSQAYGCKNWDLLSLSLQRMVLILLMAIIPISLLWLNLERIMLFMGQDSAITGMASLYCFYSLPDLLTNTLLQPLRVFLRSQKVTKPMMYCSLVAVLFHVPLNYLLVVVMELGVPGVAMASVLTNLNMVVLMAGYVCLCRKREMVFKWGYGGGVVAGLCSGLGQLMEFAVPSCLMICLEWWWYEIVTVLAGYLPRPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAAMVALGCAFVIGFINVIWTVILGQRWAGLFTSDEPVKVLVASVMPIMGLCELGNCPQTTGCGILRGTARPGVGANINLGSFYFVGTPVAVGLAFWFKVGFSGLWFGLLSAQVTCAVSIMYVVLVKTDWEAEALKAEKLTRVEMSSCNGLRSKENEKNEEMRGLLGNGNKKDDIC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01098 505 MobiDBLite consensus disorder prediction 483 505 - -
Phco5g01098 505 NCBIfam MATE family efflux transporter 33 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco5g01098 505 CDD MATE_eukaryotic 23 465 IPR045069 GO:0042910|GO:1990961
Phco5g01098 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 459 - -
Phco5g01098 505 Pfam MatE 259 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco5g01098 505 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01098 Phco-Chr5 40962971 40966379 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01098 5 40962971 40966379 Phco5g01098 5 40962971 40966379 ECH