Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01091 ATGTATGGCTTCATTCCTGGAACTTTGGTGGATTTCAATTTTCACACTTTCATCGATCTTTCTTCAGAAATCAAAACCTTCGTAGTTAAGGAAGACCAGTTGGGTTTGATCCTGATCGAAACCTACACCATGGCCATGTTCGATTCCCTCTTCAACAAAGGTTTTAAGGCTGCCAAATGTAAAACTCTTCTGAAACTGACAATTCCGCGAATAAAGCTGTTAAGAAACAGAAGAGAGAATCAGTTGAAGAATATGCGGCGTGACATTGCCAAGCTACTTGAGACTGGCCAAGAAGCCACAGCTCGTATTAGGGTAGAACACATTATCAGAGAGGAGAATATGATGGCTGCTCAAGAAATCATTGAACTCTTTTGTGAACTTATTGCTGTCCGCCTTCCAATAATTGAATCTCAAAGGGAATGTCCCCTTGACTTGAAGGAAGCTATATCTAGTGTATGTTTTGCTGCACCAAGGTGTGCGGATCTGCCAGAGCTGTTGCAGGTTCAGATGCTACTTGCTGCCAAATATGGGAAGGAATTTTTATCTGCTGCCACTGAGCTCAGGCCGGACTGCGGGGTTAATCGGCAGTTAATAGAGCTACTTTCAATTCGTGCTCCTTCACCAGAAAAGAAACTGAACCTTCTGAAAGAAATTGCTGTTGAGCATGATTTAGAATGGGACCCGGCAGCTTCAGAAACTGAGTTCTTTAAAAAACATGAAGATTTATTGAATGGCCCCACCCAATTCTTTAGTGGGTCTAAGTTGCCCCTTCCTGATGAAAAGCCCCAGGAAGAGATGTACTCTTCTCATGAAACACCCAATAAAGAAGAACCTGATTCTGATTCTGGCTCTGATACATTAGAATTTCCTGAAGTTCCTAAAGTATCAGTCCGGCCAAATGCAAATGTTGCCACAGCTCCTGAAATGGTTACACATCTGACTATGGAACCCCTTGAAGTTGATCTTGATTCATCAAGCAATTCTGGAGATTTTGAAGATGTCAAGCAGGAGCAAGTTGAAGATAGATCAGCAGTTCACAAAAATGAACCCCATACTTCAATTGCCAAAGAGAATATACAGTTTGTGCCATTCATCTCTCCTCCAGCATTATCATCTGGATCATTTTCTGCAAGACCTAGTGACTCATCTCCCACCTTTTCAAGCGCAAAATCAGAACCCAATGTGGACTTACAGGATGTGTTGGCTGCTGCCCATGCTGCTGCAGAAACTGCTGAACGGGCAGCAGCTGCAGCTCGCACAGCAGCTAGTCTTGCTCAAGTCCGAATTAATGAGCTGACTAAGAAGAGAAGTGATGAACATGTATCCGAAAGTAGCTCGGAAAACCCATTTTATGCTGGTGGTGATAATGAATCTCCAAAAAAGGATAAGCATTTCACCGAACAAAATTCTGCAGGTAACTCTGATGTCCATAATAGAAAAGATCTTGAACATTACCAGGATCATTATACTTCCCCAGGCTCTCATTCATCAAGTTTTCCTTCCTTTAACACTCTCAAGGAAGATTATGATTCCTCCCCGCCCAGTAATCATGTACTGAATGACAACTTCTCTAGTCACCAGCCCAAGAGATTACCTTCAATGGATGACGACTCATACTTCTCATATCCCAACCTATTTACCTCTCAAAACTCTAGTGTTGGATCTCAGACACATTCAGATCATAGCCGTTCCCCTCATGATCTGTGA 1707 0.4259 MYGFIPGTLVDFNFHTFIDLSSEIKTFVVKEDQLGLILIETYTMAMFDSLFNKGFKAAKCKTLLKLTIPRIKLLRNRRENQLKNMRRDIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQMLLAAKYGKEFLSAATELRPDCGVNRQLIELLSIRAPSPEKKLNLLKEIAVEHDLEWDPAASETEFFKKHEDLLNGPTQFFSGSKLPLPDEKPQEEMYSSHETPNKEEPDSDSGSDTLEFPEVPKVSVRPNANVATAPEMVTHLTMEPLEVDLDSSSNSGDFEDVKQEQVEDRSAVHKNEPHTSIAKENIQFVPFISPPALSSGSFSARPSDSSPTFSSAKSEPNVDLQDVLAAAHAAAETAERAAAAARTAASLAQVRINELTKKRSDEHVSESSSENPFYAGGDNESPKKDKHFTEQNSAGNSDVHNRKDLEHYQDHYTSPGSHSSSFPSFNTLKEDYDSSPPSNHVLNDNFSSHQPKRLPSMDDDSYFSYPNLFTSQNSSVGSQTHSDHSRSPHDL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01091 568 MobiDBLite consensus disorder prediction 540 559 - -
Phco5g01091 568 PANTHER IST1 FAMILY MEMBER 57 549 IPR005061 GO:0015031
Phco5g01091 568 MobiDBLite consensus disorder prediction 258 282 - -
Phco5g01091 568 MobiDBLite consensus disorder prediction 433 568 - -
Phco5g01091 568 Coils Coil 75 102 - -
Phco5g01091 568 MobiDBLite consensus disorder prediction 322 354 - -
Phco5g01091 568 Pfam Regulator of Vps4 activity in the MVB pathway 61 224 IPR005061 GO:0015031
Phco5g01091 568 Gene3D - 48 235 IPR042277 -
Phco5g01091 568 MobiDBLite consensus disorder prediction 370 394 - -
Phco5g01091 568 MobiDBLite consensus disorder prediction 489 529 - -
Phco5g01091 568 MobiDBLite consensus disorder prediction 456 488 - -
Phco5g01091 568 MobiDBLite consensus disorder prediction 247 295 - -
Phco5g01091 568 MobiDBLite consensus disorder prediction 328 353 - -
Phco5g01091 568 FunFam IST1-like protein isoform A 49 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01091 Phco-Chr5 40551706 40559405 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01091 5 40551706 40559405 Phco5g01091 5 40551706 40559405 ECH