Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00956 ATGCGTACTACGGCAGAATTTCAAGGTTCTGTTCTTAATCTTCGTGGGGTTCAGGTTCACTCCATGGAGGGTTCGAGCATGGAGCAAGAGCTTGATTTGTTTCAGAAGCATGTGACTGAGCGGTTCCTGGAACTATCTTCAGTTGAAAGCGGGGAGTTGCTCTCTCTTTCATGGGTTAGGAAGCTGCTGGATTCGTTTCTGTGTTGCCAAGAGGAGTTCAGGGTGATCCTCCACAACCACAGGGCTCAGGTGTTGAAGCACCCTCCCCTGGTTCGCATGGTGGGTGAGTTTTTTGAAAGGGGTGTGAAGGCACTTGATGTGTGCAACGCAATCCGTGATGGGGTTGAGCAGATTAGGCAGTGGCAGAAGCTGTTGGAGATTGTTATCTGTGCATTGGATCAGAAGAGGAGCATTGGTGAGGGCCAATTTCGCCGCGCTAAGAAGGCGCTTGTTGACTTGGCCATTGGAATGCTTGATGATAAGGAATCCAACTCCAGTGGTTCTATAGCTCATAGGAACAGGTCCTTTGGTAGAAACAACAATGGTTCAAGGGATCATCACCATAGCAATAATCTGCATAATTCCTTTGGGCATTTTAGGTCACTTTCTTGGAGTGTGTCAAGGAATTGGTCTGCTGCTAGGCAGCTCCAAGCCATTGGGAACAACTTGTCCCCCCCTAAGGCTAATGATCTTGTTGCCACCAATGGCCTTGCATTGCCTATTTACACAATGAGTTCCATTCTGGTGTTTGTTATGTGGGCACTTGTGGCCGCAATTCCTTGCCAGGACCGCGGGCTGGGGATTCATTTCTCTGTGCCGAGGCAGTTCCTGTGGGCGGCTCCGGTGGTGGCGCTGTACGAGCGGATCGTGGAGGAGTCAAAGAAGAGGGAGAGGAAGAACACCTCTGGGTTGCTGAAGGAGATTCACCAGATTGAGAAGTGTGCTAGAGTGATCAATGAGTTGGCTGATTCTGTGCAGTTTCCTTTGAGTGAGAAGAAGGGAGAAGAGGTTAGGCAGAGAGTGCAAGATGTTTCAAGGGTTTGTGAAGCCTTGAAAGATGGATTGGACCCCATGGAACGCCAAGTGAGGGAGGTGTTTCACAGAATTGTGCGCAGCAGAACTGAAGGGCTTGACACCACCCATGGCAGAGGGTAA 1155 0.4996 MRTTAEFQGSVLNLRGVQVHSMEGSSMEQELDLFQKHVTERFLELSSVESGELLSLSWVRKLLDSFLCCQEEFRVILHNHRAQVLKHPPLVRMVGEFFERGVKALDVCNAIRDGVEQIRQWQKLLEIVICALDQKRSIGEGQFRRAKKALVDLAIGMLDDKESNSSGSIAHRNRSFGRNNNGSRDHHHSNNLHNSFGHFRSLSWSVSRNWSAARQLQAIGNNLSPPKANDLVATNGLALPIYTMSSILVFVMWALVAAIPCQDRGLGIHFSVPRQFLWAAPVVALYERIVEESKKRERKNTSGLLKEIHQIEKCARVINELADSVQFPLSEKKGEEVRQRVQDVSRVCEALKDGLDPMERQVREVFHRIVRSRTEGLDTTHGRG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00956 384 PANTHER BPS1-LIKE PROTEIN 13 379 - -
Phco5g00956 384 MobiDBLite consensus disorder prediction 162 189 - -
Phco5g00956 384 Pfam Protein ROH1-like 7 379 IPR008511 -
Phco5g00956 384 MobiDBLite consensus disorder prediction 162 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00956 Phco-Chr5 15234699 15235853 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00956 5 15234699 15235853 Phco5g00956 5 15234699 15235853 ECH
Phco5g00956 5 15234699 15235853 Phco6g02374 6 44934861 44936075 PCT