Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco5g00940 | ATGGCTACAGAGGAAGAGAGTGCGGTGAAGGAGCCTTTGGATCTCATTAGGCTCAGCCTTGATGAACGTATCTATGTCAAGCTCCGTTCTGACAGAGAGCTTCGTGGCAAACTTCACGCTTATGATCAGCATCTTAATATGATTCTTGGTGATGTTGAAGAGGTTGTTACTACTGTGGAAATTGATGATGAGACATATGAAGAAATTGTGAGGACTACTAAGCGGACGGTTCCTTTCCTGTTTGTTAGGGGAGATGGGGTGATATTGGTTTCCCCGCCCTTGAGGACTGCATAA | 294 | 0.4524 | MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco5g00940 | 97 | ProSiteProfiles | Sm domain profile. | 11 | 96 | IPR047575 | GO:0003723 | |
| Phco5g00940 | 97 | SMART | Sm3 | 14 | 92 | IPR001163 | - | |
| Phco5g00940 | 97 | CDD | LSm3 | 11 | 92 | IPR034105 | GO:0000398|GO:0003723 | |
| Phco5g00940 | 97 | Pfam | LSM domain | 16 | 92 | IPR001163 | - | |
| Phco5g00940 | 97 | Gene3D | - | 2 | 94 | - | - | |
| Phco5g00940 | 97 | SUPERFAMILY | Sm-like ribonucleoproteins | 11 | 93 | IPR010920 | - | |
| Phco5g00940 | 97 | FunFam | U6 snRNA-associated Sm-like protein LSm3 | 2 | 94 | - | - | |
| Phco5g00940 | 97 | PANTHER | U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 | 1 | 96 | IPR040002 | GO:0003723 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco5g00940 | 5 | 14197609 | 14200174 | Phco5g00940 | 5 | 14197609 | 14200174 | ECH |