Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00936 ATGATTGCTTATTTTTTGAAAACATTTTATGTTCTTCTCCTGCTTTCTCTGCTTACTTCAGGAATTACTGTGACATTAAACAACTCAAGAGAAACTGGTGAAGCAAAGTGCATAGAGAGGGAGAGGCAAGCACTCCTCGGCTTCAAACAAGGCCTCATAGATGACTTTGGCATGCTGTCCTCTTGGACCAACCATCACAACAATACAGATTGCTGCAAATGGAAACGCATTCACTGCAACAATCAAACTGGTCACGTACTGCTGCTTGATCTTCATGGAAACTTCCGAATTACACCGTATTTGAGAGGTGCAATCAATCTCACTTCATTGATTCACTTGCAATACATTCAATACCTGGATCTCAGCAATAATTACTATGCAATGAGTTACATCCCACACTTCAGTGGCTCCTTCACCAACTTGAGATATCTCGATCTCTCCAATTCTTATTTTGCAGGGAGGATTCCTTCTACACTTGGAAATCTCTTACAACTACGCTATCTGGATCTTGGGAATAATTATCTTTGGGGAGAAATACCTATACAGATTGGGAGTCTCAACCACTTACACTATCTCGATCTTGGAAGAACTTTTCTTTCCGGAAAAATCCCATATCAACTTGGGAATCTCAGAAAGCTACAATATCTCAGTCTTGGAAGTAACCCTCCTCTGCCATTAGGCACAACCACAAACTATATTTCAAATTCCCTTTCTGGAGCAATCCCTTTTCACATAGGAAATATTCTCCGACTAGTAGGAAATTTTGAAATTAAAGCTAAGGATGCACAGTGGCTGTCTTCTCTCCATTCCTTAACAATTCTTGAGCTCAGTTCATTGCATACTCTTAGCTCCTCTTACCAGTGGCTACAAACAATCAGTAAGATCATTCCAAACTTATCAGAGCTATGGCTAGTTGATTGTGATCTTTCAGATAATGATATTCAATCTTTGTTTCATTCTCATTCTTCCAACAATTCCATTTCTCTTACCATCCTAGATCTCTCTTCTAATATGTTGACATCATCAACACTTCAATTCTTGTCTAACTTTAGCCTTCATCTTCAAGAGCTTCATCTTTCTCACAATAATATAACTTTGTCACCTTCTGTATGTCCAAATTTTCCATCTCTTAATATCCTCGACCTCTCTTACAGCAATCTTGCGTCATCAATGTTTCTAGCTAATTTTAATATCAGCTCCAAACTGCAAGTGCTTTATCTGGAAAACTGCAATCTTACAGATGGAAGTTTTCGTCTTTCATCACCTTCCACAAAGAATTCTCTGTCTTTTCTTATCTTCCTTGATCTTTCTCATAACTTGTTAAAGTCATGCTCTATATTTCACCGGCTTGCTAACTTCACCACCAATCTGCTTGTCCTTGAACTTGATTATAATTTCTTGGAAGGTCCCATTCCAGATGAATTTGGGAAAGCGATGAACTATCTTGAATATCTTTTTCTCTCCAATAACAAACTCCAAGGGAAGGTGTCGTCTTTCTTTGGCAGCATGTGCAGACTACATTTATTAGACCTCTCAAATAACAAGCTAAATGGGGAATTTCCGAACTTCATTCAAAATTCTTCATGGTGCAGCAGACACATATTTAGAGCATTGAACTTATCTTATAACCAAATTACTGGCAAGATACCAGAGAGTATCAAACTGCTATCTGAGTTGGAGAGTTTATCGTTGGAGGGGAATTCTTTAGAGGGTGATGTCACTGAATCTCATCTTTCTAAATTTTCAAAATTAATTTCATTATCCTTGTCACACAACTCATTGTCTCTAAAATTTGACTCTAATTGGGTTCCTCCTTTTCAATTAAATTATTTGGATCTTGCATCTTGCAAGCTAGGCCCGAATTTTCCTAGTTGGCTACAAACTCAAAATTCCTTAATAACATTAGATATATCTAATAACGGGCTGAATGATTTTGTACCGGAATGTTTTTGGAACAAGTTGCAAATTATGTACGAGTTGAATATGTCTCACAATAATCTCATTTGTTCAATTCCTAATATGAAATTGAAGCTTCCTTTCAGACCATCTATAAATTTAAATTCAAATAGATTTGAGGGAACAGTTCCATTCTTTTTTCTACAAGCATCAGAGCTGTTACTCTCTGCAAATAAATTTTCAGATTTCTTGTGTGAAAAGGTCACAGCTGTAACTTTGGCCACTTTAGATTTATCATATAATCAATTAAAGGGGCAACTTCCAGATTGTTGGAAATCTGTAAACCGATTATTGTTTCTTGATTTAAGCAGCAATCAGTTGTCAGGAAATATTCCTATCTCCATGGGCACCCTTGTTAACTTGGAAGCTTTAGTTTTGGCAAACAATAGTTTAATGGGCGAATTGCCTTTCTCTTTGAAGAATTGCAGCCATTTAATTATGGTGGATGTGAGTGAGAATATGTTGTCCGGTCCAATACCATCATGGATTGGAGAAAACATGCAGCAATTGATAATTTTGAACATGGGAGGGAATCAGTTCTCTGGAAATCTTCCCCTTCATCTATGTTATTTGAAGCGTATTCAATTGTTGGATCTTTCAAGGAATAAGTTATCAGAAGGAATTCCAACTTGCTTGAACAATTTTACTGCATTGTCTGAGAAGAGCATCAACAGAACTGAAACCGAAAGTCATGTGCATTGGTACAACAGTACTTACTCTGAAATTTATAACTTTTTTCGTGTTAGTGATTATACGCTTCATATAACATGGATGTGGAAAGGTTTGGAACGCAGCTTCACACGTCCCGAATTGATTCTTTAG 2778 0.3701 MIAYFLKTFYVLLLLSLLTSGITVTLNNSRETGEAKCIERERQALLGFKQGLIDDFGMLSSWTNHHNNTDCCKWKRIHCNNQTGHVLLLDLHGNFRITPYLRGAINLTSLIHLQYIQYLDLSNNYYAMSYIPHFSGSFTNLRYLDLSNSYFAGRIPSTLGNLLQLRYLDLGNNYLWGEIPIQIGSLNHLHYLDLGRTFLSGKIPYQLGNLRKLQYLSLGSNPPLPLGTTTNYISNSLSGAIPFHIGNILRLVGNFEIKAKDAQWLSSLHSLTILELSSLHTLSSSYQWLQTISKIIPNLSELWLVDCDLSDNDIQSLFHSHSSNNSISLTILDLSSNMLTSSTLQFLSNFSLHLQELHLSHNNITLSPSVCPNFPSLNILDLSYSNLASSMFLANFNISSKLQVLYLENCNLTDGSFRLSSPSTKNSLSFLIFLDLSHNLLKSCSIFHRLANFTTNLLVLELDYNFLEGPIPDEFGKAMNYLEYLFLSNNKLQGKVSSFFGSMCRLHLLDLSNNKLNGEFPNFIQNSSWCSRHIFRALNLSYNQITGKIPESIKLLSELESLSLEGNSLEGDVTESHLSKFSKLISLSLSHNSLSLKFDSNWVPPFQLNYLDLASCKLGPNFPSWLQTQNSLITLDISNNGLNDFVPECFWNKLQIMYELNMSHNNLICSIPNMKLKLPFRPSINLNSNRFEGTVPFFFLQASELLLSANKFSDFLCEKVTAVTLATLDLSYNQLKGQLPDCWKSVNRLLFLDLSSNQLSGNIPISMGTLVNLEALVLANNSLMGELPFSLKNCSHLIMVDVSENMLSGPIPSWIGENMQQLIILNMGGNQFSGNLPLHLCYLKRIQLLDLSRNKLSEGIPTCLNNFTALSEKSINRTETESHVHWYNSTYSEIYNFFRVSDYTLHITWMWKGLERSFTRPELIL 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00936 925 SUPERFAMILY L domain-like 428 697 - -
Phco5g00936 925 ProSiteProfiles Leucine-rich repeat profile. 328 348 IPR001611 GO:0005515
Phco5g00936 925 SUPERFAMILY L domain-like 36 441 - -
Phco5g00936 925 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Phco5g00936 925 Gene3D Ribonuclease Inhibitor 36 250 IPR032675 -
Phco5g00936 925 PRINTS Leucine-rich repeat signature 843 856 - -
Phco5g00936 925 PRINTS Leucine-rich repeat signature 749 762 - -
Phco5g00936 925 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Phco5g00936 925 Pfam Leucine Rich Repeat 631 651 IPR001611 GO:0005515
Phco5g00936 925 SUPERFAMILY L domain-like 704 871 - -
Phco5g00936 925 FunFam Tyrosine-sulfated glycopeptide receptor 1 527 818 - -
Phco5g00936 925 FunFam Leucine-rich repeat receptor protein kinase EMS1 131 224 - -
Phco5g00936 925 PANTHER LRR RECEPTOR-LIKE KINASE 429 529 - -
Phco5g00936 925 Gene3D Ribonuclease Inhibitor 251 602 IPR032675 -
Phco5g00936 925 Gene3D Ribonuclease Inhibitor 603 897 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00936 Phco-Chr5 14075111 14077888 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00936 5 14075111 14077888 Phco5g00936 5 14075111 14077888 ECH