Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00928 ATGAGATCTTACTTTCTGAAAATATTATATGCTCTTCTGCTTTTATTTCATGAATTAGGATTTGGTCTCGGATTCAAAGGGTCAATGAGAAGTGCTGATGCAAAGTGCAGAGAGAAGGAGAAACAAGCACTCCTCAACTTCAAACAAAGCCTCATAGATGACTATGGCATACTGTCTACATGGAGTGACCATCAAAATAATACAGATTGCTGCAATTGGAAAGGCATTCAATGCAACCATCAAACTGGTTATGTACATCTACTCGATCTTCGTTGTCTTGATAAACAGTATTTGAGAGGTGCAATCAATCTCTTTTCCTTGATTCACTTGCAATATATTCAACATCTGGACCTCAGCAATAATGATTTTCTGTTGAATCACATACCACAGGCCATTGGCTCTTTCACCAACTTAAAATATCTCAACCTCTCATTTTCTGAATTTAGTGGGAGGATTCCTTTTAAACTTGGAAATCTTTCACTATTAAGGTGTCTAGACCTTGGAAGAAATTATCTTCGGGGACCAGTTCCTTTTCAGATTGGGAATCTTAGACAGTTACAATATCTTGATCTTGGAGGGAATTATCTATCAGGAGAAATCCCATTTCAACTTAGGAATCTCAAGCGGTTGCAATATCTTAATCTTGCAGGTAGCTCTCTTTCGGGAGCTATCCCTTTTCAGAATGGCAATCTTCCTAACTTACAAACTCTTAGGCTAAGTGGTGATTTCGATACAGAAGCTGAGGATTCAGAGTGGTTGTCTAATCTCCATTCCTTAACACGTCTCGAGTTGAGCTCATGGCATAATCTTAGCTTCTCTCGCCAGTGGCTACAAACTATCAGTGAGCGTATTCCAAACTTAATAGATTTGAGGCTTTTTGGTTGTTCTCTTTCAGATAATAATATAAAAATTTTGTTCCATTCTCGTTCCAACTTTTCAACTTCTCTTACTGTCCTTGACTTGTCTTCTAATATGTTAACTTCCTCAACATTTCAACTGTTATTCAATTTTAGCTTTCATCTACAGGAGCTTTATCTTACAGACAATCGCATAGCTCTGTCATCTTTTTTGTATCCAAATTTTCCATCTCTTAATATCCTTCATCTCTCTATGAATAACCTAACATCGTCTGTATTTGAAGGTAATTTTAATTTTGGCTCCAAACTACGAGAGCTTCATCTGTTTAACTGTAGTCTTACAGATCAAAGTTTTCTTATTTCATCTGCTTCCACAATTAATTCTTCGTCTTCTCTTGCCATCCTTGATCTCTCCTCCAATCTATTGAAATCATCTATTATCTTTTATTGGCTTCTGAACATCACCACTTATCTCCAGACCCTTGACCTTACTAGTAACATGTTAGAAGATCCCATTCCAGATGGATTTGGAAAAGTAATGAACTCTCTAGAAGGTTTTTATGTCTCTGAGAATAGACTACATTCCGTCTTTCTTTGGAAACAAGTGCAGATTGCAGATCTTAGATCTCTCAAGTAA 1494 0.3681 MRSYFLKILYALLLLFHELGFGLGFKGSMRSADAKCREKEKQALLNFKQSLIDDYGILSTWSDHQNNTDCCNWKGIQCNHQTGYVHLLDLRCLDKQYLRGAINLFSLIHLQYIQHLDLSNNDFLLNHIPQAIGSFTNLKYLNLSFSEFSGRIPFKLGNLSLLRCLDLGRNYLRGPVPFQIGNLRQLQYLDLGGNYLSGEIPFQLRNLKRLQYLNLAGSSLSGAIPFQNGNLPNLQTLRLSGDFDTEAEDSEWLSNLHSLTRLELSSWHNLSFSRQWLQTISERIPNLIDLRLFGCSLSDNNIKILFHSRSNFSTSLTVLDLSSNMLTSSTFQLLFNFSFHLQELYLTDNRIALSSFLYPNFPSLNILHLSMNNLTSSVFEGNFNFGSKLRELHLFNCSLTDQSFLISSASTINSSSSLAILDLSSNLLKSSIIFYWLLNITTYLQTLDLTSNMLEDPIPDGFGKVMNSLEGFYVSENRLHSVFLWKQVQIADLRSLK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00928 497 FunFam Nuclear pore complex protein NUP107 37 202 - -
Phco5g00928 497 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Phco5g00928 497 SUPERFAMILY L domain-like 66 404 - -
Phco5g00928 497 Gene3D Ribonuclease Inhibitor 247 496 IPR032675 -
Phco5g00928 497 Gene3D Ribonuclease Inhibitor 125 246 IPR032675 -
Phco5g00928 497 Gene3D Ribonuclease Inhibitor 32 124 IPR032675 -
Phco5g00928 497 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 340 480 - -
Phco5g00928 497 SUPERFAMILY L domain-like 359 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00928 Phco-Chr5 13828275 13829768 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00928 5 13828275 13829768 Phco5g00928 5 13828275 13829768 ECH