Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00794 ATGAGGCTTTGTTTTTTGCTACGGTTCGTGATGATCAGGTACGGACTAAAGCATTTGCAATTGCATGCTGTAACGATGGCTGTTGAGTGGTTGTGTGATAGAAGAAGAACGGGGTCTAGGGTTCCTTTTTCCAAGGCACCGAAGATAAAGGCTGAAGGAAGGCAACCCAATCGGGATTTCCGAACAGAGAAGAGAAAACAGAATATAGAACACGAAGAATCTAGAGGTAAAGGAAATGTTCTGAAGATGCTTGCACTGACAGATTCTCCTCTACTTATTGCTAAGACATTTGAAATCATTAAAATACCAGCAAGTACACGAGGCACTGTGGTATGTGCTGCAAAAGGTCCAAGACCAAGGTATCCCAGAGTTTGGAAGACTAATAAAAGAATTGGGACCATTTCCAAGTCTGAGAAGCTTGTTAAGTCTATTAAGGAGCTGTCAAATGTCAAAGAAGAAGTTTATGGAGCTCTTGATTCCTATGTTGCTTGGGAATTAGAATTCCCTTTAATTACAGTAAAAAAGGCGCTCAAGACCCTAGAATTCGAACAAGAGTGGAAGCGTGTAATACAGGTAACAAAATGGATGTTAAGCAAAGGTCAAGGAAAGACTATGGGAAGCTATTTTACATTAATTAATGCTTTAGTAAATGATGATCGACTTGATGAAGCTGAAGAGCTTTGGACAAAGTTATTAATGCAGTATATGGAAAGTTTGCCTCGTAGATTTTTCGATAAAATGATATCTGTCTACCGTAAGAAGGGCATGCATGAGAAGATGTTTGAGATATTTGCAGACATTGAGGAGCTTGCTATGCGACCTAGTATTTCTACTGTCGCAATGGTTGGAGAAGCCTTTAAAGAGCTGAGTATGCTAGACAAATACCATAAGTTACATGCAAAATATCCACCACCACAATGGGAATATAGATACAGCAGAGGAAAGCGTATAAAAGTTAAAGTGCAATCTCAATCTACACAGGTCAACACATGGACTGAAAGGCTTGAGGATGTTGAACCAGACTCAGACTTAAACACGAATTATAGATCTTCTGAAGAGACTTCGGAGATAATTGATGACCAGCAACTCGAACAGGATAATGATGGAACATCTATGGAACCTGAACAAATTTCAGACATAAACGAGAATTATATATCTGAAGAGACTTCAGGGATAATTGATGACGAGCAACTCAGGCAGGATGCCGATTTAACATCCATGGAACTTGAACAAATTTCAGACAATTCATATGACATTATGGAACCGATTTTAGATGTCTAA 1281 0.3903 MRLCFLLRFVMIRYGLKHLQLHAVTMAVEWLCDRRRTGSRVPFSKAPKIKAEGRQPNRDFRTEKRKQNIEHEESRGKGNVLKMLALTDSPLLIAKTFEIIKIPASTRGTVVCAAKGPRPRYPRVWKTNKRIGTISKSEKLVKSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFEQEWKRVIQVTKWMLSKGQGKTMGSYFTLINALVNDDRLDEAEELWTKLLMQYMESLPRRFFDKMISVYRKKGMHEKMFEIFADIEELAMRPSISTVAMVGEAFKELSMLDKYHKLHAKYPPPQWEYRYSRGKRIKVKVQSQSTQVNTWTERLEDVEPDSDLNTNYRSSEETSEIIDDQQLEQDNDGTSMEPEQISDINENYISEETSGIIDDEQLRQDADLTSMELEQISDNSYDIMEPILDV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00794 426 MobiDBLite consensus disorder prediction 51 74 - -
Phco5g00794 426 Pfam PPR repeat 247 269 IPR002885 -
Phco5g00794 426 Pfam PPR repeat 210 231 IPR002885 -
Phco5g00794 426 PANTHER OS01G0757700 PROTEIN 102 355 IPR044646 -
Phco5g00794 426 Gene3D Tetratricopeptide repeat domain 137 302 IPR011990 GO:0005515
Phco5g00794 426 MobiDBLite consensus disorder prediction 42 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00794 Phco-Chr5 9353388 9358209 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00794 5 9353388 9358209 Phco5g00794 5 9353388 9358209 ECH