Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00769 ATGGCGGATGCTGAAACCTTCGCGTTCCAGGCTGAGATCAACCAGCTTCTGAGCCTCATCATCAACACCTTCTACAGCAACAAGGAGATCTTCTTGCGTGAACTCATAAGCAACTCTTCTGATGCTTTGGATAAGATTAGGTTCGAGAGTTTAACCGACAAGAGCAAGCTCGATGCTCAGCCAGAGCTTTTCATTCGGCTCGTGCCTGACAAGGCCAACAAGACTCTTTCCATTATTGACAGTGGCATTGGAATGACTAAAGCAGATTTGGTGAATAACCTTGGTACCATTGCGAGGTCTGGGACCAAGGAATTCATGGAGGCGCTGCAGGCTGGTGCTGATGTAAGCATGATTGGGCAATTCGGTGTGGGGTTCTACTCTGCTTACCTTGTTGCGGAGAAAGTCATCGTTACCACCAAGCATAATGATGATGAACAGTACGTTTGGGAATCTCAGGCTGGTGGTTCATTCACTGTTACTAGGGACACTGACGGCGAGCAACTCGGAAGGGGAACTAAGATTACTCTCTTCCTCAAGGAAGATCAGTTGGAGTACTTGGAGGAAAGGAGGATCAAGGATCTTGTGAAGAAGCACTCTGAATTCATTAGCTATCCTATCTACCTATGGACGGAGAAGACAACCGAGAAAGAAATTAGCGATGATGAAGATGATGAGCCCAAGAAGGAGGAAGAAGGGGATATTGAGGAGGTTGACGAGGACAAGGAGAAAGACTCTAAGAAAAAGAAGAAGATCAAGGAGGTTTCTCACGAGTGGCAACTCATCAACAAGCAGAAACCAATTTGGCTGCGGAAGCCAGAAGAGATCACCAAGGATGAATACGCTTCTTTCTACAAGAGCCTGACCAACGACTGGGAAGAGCACTTGGCTGTGAAGCATTTCTCTGTGGAGGGCCAGCTTGAGTTCAAGGCCATTCTCTTTGTACCAAAGAGGGCACCCTTTGATCTGTTTGACACCAGGAAAAAGATGAACAATATCAAGCTTTATGTCCGGAGGGTGTTCATCATGGACAATTGTGAAGAGCTCATTCCTGAGTACCTTGGATTTGTGAAAGGTGTTGTTGACTCCGATGATTTGCCCCTCAACATCTCTCGTGAAATGTTACAACAGAACAAGATCTTGAAGGTGATCAGAAAGAATCTTGTGAAGAAGTGTATTGAGATGTTCAACGAAATTGCAGAGAACAAGGAAGATTACAATAAGTTCTATGATTCTTTTTCAAAGAATTTGAAGTTGGGTATCCATGAGGATAGCCAGAACAGGTCCAAATTGGCGGATTTGCTCAGATATCACTCAACAAAAAGTGGTGATGAAATGACAAGCTTGAAGGACTATGTTACAAGGATGAAAGAGGGACAAAAGGACATTTACTACATCACTGGAGAGAGCAAAAAGGCTGTGGAGAACTCACCCTTCTTGGAGAGACTGAAGAAGAAGGGCTATGAGGTTCTGTACATGGTGGATGCTATTGACGAGTACGCAGTCGGACAACTCAAGGAGTACGATGGCAAGAAATTGGTCTCAGCTACAAAGGAGGGTTTGAAGCTGGATGATGAAACTGAAGAAGAGAAAAAGAAGAAGGAGGAGAAGAAGAAATCATTTGAAGAACTCTGCAAGGTCATCAAGGACATTCTGGGAGACAAAGTGGAGAAGGTTGTTGTCTCAGACAGAATTGTTGATTCTCCTTGCTGTTTGGTGACTGGCGAGTATGGATGGACTGCAAACATGGAGAGAATCATGAAGGCTCAGGCTCTGAGAGACAACAGCATGAGTGGCTACATGTCTAGCAAGAAGACCATGGAGATCAACCCTGACAATGGTATAATGGAGGAGTTGAGGAAGAGAGCTGAAGCTGACAAGAATGACAAATCTGTGAAGGACCTTGTGTTGCTTCTCTTTGAGACAGCCCTTTTGACCTCAGGTTTCAGCCTTGATGATCCTAACACTTTTGCTTCGAGGATTCACAGGATGTTGAAGCTGGGTCTCAGCATTGATGAAGATGAGAATGCTGGTGGCGATGATATTGACATGCCCCCATTGGAAGAGAATGGTACTGAGGAGAGCAAGATGGAAGAAGTGGACTAA 2103 0.4498 MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRLVPDKANKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDTDGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDIEEVDEDKEKDSKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKDEYASFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDSFSKNLKLGIHEDSQNRSKLADLLRYHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFEELCKVIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDNSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFASRIHRMLKLGLSIDEDENAGGDDIDMPPLEENGTEESKMEEVD 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00769 700 Gene3D - 2 228 IPR036890 -
Phco5g00769 700 Pfam Hsp90 protein 184 680 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Phco5g00769 700 MobiDBLite consensus disorder prediction 672 700 - -
Phco5g00769 700 SUPERFAMILY HSP90 C-terminal domain 542 664 IPR037196 -
Phco5g00769 700 FunFam Heat shock protein 90 alpha 518 669 - -
Phco5g00769 700 CDD HATPase_Hsp90-like 14 202 IPR020575 -
Phco5g00769 700 Hamap Chaperone protein HtpG [htpG]. 2 665 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Phco5g00769 700 PRINTS 90kDa heat shock protein signature 170 187 IPR020575 -
Phco5g00769 700 PRINTS 90kDa heat shock protein signature 26 48 IPR020575 -
Phco5g00769 700 PRINTS 90kDa heat shock protein signature 75 92 IPR020575 -
Phco5g00769 700 PRINTS 90kDa heat shock protein signature 5 25 IPR020575 -
Phco5g00769 700 PRINTS 90kDa heat shock protein signature 93 110 IPR020575 -
Phco5g00769 700 PRINTS 90kDa heat shock protein signature 118 140 IPR020575 -
Phco5g00769 700 PRINTS 90kDa heat shock protein signature 188 206 IPR020575 -
Phco5g00769 700 Coils Coil 522 543 - -
Phco5g00769 700 MobiDBLite consensus disorder prediction 673 687 - -
Phco5g00769 700 SMART HKATPase_4 27 182 IPR003594 -
Phco5g00769 700 Gene3D - 431 517 - -
Phco5g00769 700 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5 213 IPR036890 -
Phco5g00769 700 Gene3D - 518 669 IPR037196 -
Phco5g00769 700 FunFam Heat shock protein 90 alpha 262 430 - -
Phco5g00769 700 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 181 IPR003594 -
Phco5g00769 700 MobiDBLite consensus disorder prediction 217 238 - -
Phco5g00769 700 Gene3D - 262 430 - -
Phco5g00769 700 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 5 697 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Phco5g00769 700 Coils Coil 227 247 - -
Phco5g00769 700 FunFam Heat shock cognate protein 2 228 - -
Phco5g00769 700 ProSitePatterns Heat shock hsp90 proteins family signature. 25 34 IPR019805 GO:0005524|GO:0006457|GO:0051082
Phco5g00769 700 MobiDBLite consensus disorder prediction 215 248 - -
Phco5g00769 700 FunFam Heat shock protein 90 alpha 431 517 - -
Phco5g00769 700 SUPERFAMILY Ribosomal protein S5 domain 2-like 263 518 IPR020568 -
Phco5g00769 700 PIRSF HSP90_HTPG 1 700 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00769 Phco-Chr5 8794194 8797012 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00769 5 8794194 8797012 Phco5g00769 5 8794194 8797012 ECH