Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00753 ATGGCGGTAGGACTCTCCGCCGCCATAACCTTGAAGCCCCTCCTCCACTACCACCACCCCCACTTTCCCAAAACAATCCCAGCCACACTCCCTTTCTCTCCCTTGAGAATTTCCCACCACACAACCTTCCTAAAGATCCAAAAGTTGTCACCTTTCACTGTCTGTGTCCTCACCCAGGACCCCAAACAAAGCACCCACATGGAAATTGAGGAGCAGGAACAACAGTCACCTCCTCCTCCACAAGTTTTGTCACCAAAGTTGGCAGAGAAATTGGCCAGAAAAGAGTCTGAGAGGTTCACCTACCTCATTGCTGCTGTCATGTCCAGCTTGGGTGTCACATCCATGGCGGTGCTCGCTGTTTATTACAGATTCGCGTGGCAAATGGAGGGTGGAGAAGTGCCTTTGTCTGAAATGTTTGGCACATTTGCTCTGGCAGTGGGTGCTGCTGTAGGTATGGAGTTTTGGGCTAGATGGGCTCATAGGGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATCGACCAAGAGAAGGACCCTTCGAACTGAACGATGTATTTGCCATAACCAATGCTGTCCCTGCCATTGGTCTTCTTTCCTATGGTTTCTTTCACAAAGGACTCATCCCTGGTCTTTGCTTCGGTGCGGGTCTTGGAATTACGGTCTTTGGGATGGCCTACATGTTTGTACACGATGGCTTGGTTCATAAGAGATTCCCTGTGGGCCCCATTGCCAACGTGCCCTACTTCAGAAGAGTGGCTTCTGCTCACCAACTTCACCATTCGGAAAAATTTGATGGTGTACCGTATGGGCTGTTTCTGGGACCAAAGGAAGTTGAAGAGGTAGGAGGGCTAGAAGAGTTGGAGAAAGAGATAAGTAGGAGAGCAAGATCATACAAAAATAGTTCATGA 918 0.4967 MAVGLSAAITLKPLLHYHHPHFPKTIPATLPFSPLRISHHTTFLKIQKLSPFTVCVLTQDPKQSTHMEIEEQEQQSPPPPQVLSPKLAEKLARKESERFTYLIAAVMSSLGVTSMAVLAVYYRFAWQMEGGEVPLSEMFGTFALAVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAITNAVPAIGLLSYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSEKFDGVPYGLFLGPKEVEEVGGLEELEKEISRRARSYKNSS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00753 305 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
Phco5g00753 305 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
Phco5g00753 305 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00753 Phco-Chr5 8494077 8496629 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00753 5 8494077 8496629 Phco6g02440 6 45821675 45823610 ECH
Phco5g00753 5 8494077 8496629 Phco5g00753 5 8494077 8496629 ECH
Phco5g00753 5 8494077 8496629 Phco6g02440 6 45821675 45823610 PCT