Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00737 ATGGCTTCCCACTACGAACTTGAAGTGAATCTCGCGTCAGCGCGTGGCTTAAAAAACGTGAACTGGCGCCACGGCGCGAACCGCCCATACGCTGTTGTTTGGGTGGACGCTAAGAACAAGTGCTCCACGAGCGTCGACGATGACGGCGACACCGAAGCCACGTGGAATCAAACCCGGGTTATTCCTCTTCCTCCCGAGCCTCTTGAGAATCTCACGCTCCACGTCGACGCGGTTCACGCCGGCTCCGAGGAGGACACTGAGCCGCTGATCGGCTCGGCTCGGCTGAAGGTTGTTGAAGTCCTTGAAGACGTTGGAATCGGAGCGCGCGTGAGCCGCACTCTCGCGCTGAAGCGCCCCTCGGGAAGACCCCAAGGGAAGGTGGACGTTAATGTCGTTATAAGAGAGGCTGGTGGCTATCGTACGCGGGATGCGTACTACGCGCCTCCTTTAGGTGTAAGGGATTATTCCCCTGCGCCGCAGGGCTATGGGTACCCGTCTCATCAGGATAATAATAATAATTATAATTCTGCACCGAAAACGACGTCGTATGGACAAGGGAGTAGTTATAGCTACGGGACCGCTAGAGAAGAGAAGAAGAGTAAGTTTGGAGGGATGGGGACAGGACTGGCTGTGGGCGCGGTCGCTGGGGTTCTAGGTGGAGTCGCGCTCGTGGAGGGTGCTGATTTTCTGGAGGACAAGATTGCTGATGACGTGGCAGAGAACGTTGAGGATGATCTTGGATATGATGAAGATGATTTCTAG 762 0.5551 MASHYELEVNLASARGLKNVNWRHGANRPYAVVWVDAKNKCSTSVDDDGDTEATWNQTRVIPLPPEPLENLTLHVDAVHAGSEEDTEPLIGSARLKVVEVLEDVGIGARVSRTLALKRPSGRPQGKVDVNVVIREAGGYRTRDAYYAPPLGVRDYSPAPQGYGYPSHQDNNNNYNSAPKTTSYGQGSSYSYGTAREEKKSKFGGMGTGLAVGAVAGVLGGVALVEGADFLEDKIADDVAENVEDDLGYDEDDF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00737 253 Pfam C2 domain 6 101 IPR000008 -
Phco5g00737 253 MobiDBLite consensus disorder prediction 163 191 - -
Phco5g00737 253 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Phco5g00737 253 MobiDBLite consensus disorder prediction 157 191 - -
Phco5g00737 253 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Phco5g00737 253 Gene3D C2 domain 1 134 IPR035892 -
Phco5g00737 253 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
Phco5g00737 253 PANTHER INGRESSION PROTEIN FIC1 6 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00737 Phco-Chr5 8177397 8178158 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00737 5 8177397 8178158 Phco5g00737 5 8177397 8178158 ECH