Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00734 ATGAATTCCATAAATGCTTCCCAACAACACTGCTCTATATTAATAATCATCCAAACTCACAGCACTGCTATCACATCAAACCAGCACTCAATTCACATTTTTCTTCCACCACACAGTTTCTCAAGAAAAAAAATGGCAGGTGAGCTGGTGAAGAAGGAAGAGTCTCTCAACCTGAAAATCACTAACAAGAGCCATGTGCAACCTGAGGAGAAAATTGGGAGGAAGGAGTACCAATTGGTCACTTTTGATCTTCCCTACTTGGCCTTCTACTACAACCAGAAGCTACTGTTTTACAAAGGGGAAGACTTTGATGGCATGGTTCAGAAGCTGAAACTTGGACTTGGTGTAGTCCTGAAGGAATTCCATCAACTAGCTGGAAAGTTAGGGAAAGATGAAGATGGGGTGTTTAGGGTTGAGTATGATGATGACATGGTTGGTGTGGAGGTTGTTGAAGCTGTTGCTGATGAGATTGCTGTGGATCAACTAACTGTGGCTGAAAGTAGCAGCAATCTGAAGGAGCTCATACCTTATACAGGTATCTTAAACTTGGAAGGCATGCATAGACCCTTGCTGGCAGTTCAGTTAACGAAGCTGAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCACGCGGTATTGGATGGGACTGCCACGTGGCAATTCATGACCTCGTGGGCCGAGCTTTGCAGCGGCTCACCCTCCACGTCAGCACCACCCTTCCTGGACCGGACCAAGGCCCGGAACACGCGAGTGAAGCTGGACCTCTCACTCCCCGAGCCCAACGAAAAACCAACTTCCAACGGCGAGGCAAAGCCCACTCTCAGGGAAAGGATATTCAAATTCTCCGAGTCAAAGATCGACAAGATCAAGTCAACGGTCAACGAGAACCCTCCATCGGACGGCTCAAAGCCGTTCTCAACATTTCAGGCTCTTTCCTCCCATATTTGGCGCCATGTAAGCCATGCACGTAACCTGAAGCCGGAGGATTACACCGTGTTCACCGTCTTTGCCGACTGCCGGAAGCGGGTTGACCCACCTATGCCGGAGAGTTACTTCGGAAACCTAATTCAGGCTATATTTACCGTTACGGCGGCTGGACTTTTATCAGCCCATCCGCAGCAATTTGCGGCTTCATTGGTGCAGAAGGCCATTGAAGCTCACAATGCAAAGGCTATTGATGAACGAAATAAGGAGTGGGAAAGTGCACCCAAGATCTTTGAATTCAAAGATGCAGGGGTGAATTGTGTGGCAGTGGGAAGCTCCCCAAGGTTCAAGGTTTATGACATTGATTTTGGGTGGGGAAAGCCAGAGAATGTGAGGAGTGGAACTAATAACAAGTTTGATGGGATGATTTATTTGTATCCAGGGAAGATTGGAGGGAGGAGCATCGATGTGGAACTAACCTTGGAGCCTGAGGCTATGGGGAGGTTGGAACAAGACAAGGATTTTCTTTTGGAAGCATAA 1464 0.4768 MNSINASQQHCSILIIIQTHSTAITSNQHSIHIFLPPHSFSRKKMAGELVKKEESLNLKITNKSHVQPEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFDGMVQKLKLGLGVVLKEFHQLAGKLGKDEDGVFRVEYDDDMVGVEVVEAVADEIAVDQLTVAESSSNLKELIPYTGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAELCSGSPSTSAPPFLDRTKARNTRVKLDLSLPEPNEKPTSNGEAKPTLRERIFKFSESKIDKIKSTVNENPPSDGSKPFSTFQALSSHIWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPESYFGNLIQAIFTVTAAGLLSAHPQQFAASLVQKAIEAHNAKAIDERNKEWESAPKIFEFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKIGGRSIDVELTLEPEAMGRLEQDKDFLLEA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00734 487 Gene3D - 55 256 IPR023213 -
Phco5g00734 487 Pfam Transferase family 58 483 - -
Phco5g00734 487 FunFam Tryptamine hydroxycinnamoyl transferase 260 481 - -
Phco5g00734 487 Gene3D - 257 480 IPR023213 -
Phco5g00734 487 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 60 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00734 Phco-Chr5 8090678 8093550 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00734 5 8090678 8093550 Phco5g00734 5 8090678 8093550 ECH