Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00709 ATGGATTCGAAGCAACTCGATCGCGTGGGTCGAAAGGTTCGGGTCGTCGCCAGGATCCGCGGGTTTTCGGGTCCTGAGGCTAATTCGGAGCCTGGCACTGCGAGGACTGTGGAGTGGATTTCGGTGAACGGCGAAAATTCGGATGATGTCTCTATCTCCTTCAGAGACCATTCTAGTCGTTATTTGGTGGACCATTGCTATAAGGAAGATGAAGACAGTGAAATGATATATTCAAGGGAGGTGAAGCCTCTTGTGTCTGCAGCTTTTGAAGGTCATAACAGCACTGTTATTGCACATGGAGCTAGGGGTAGTGGAAAGACCCACATAATTCAGGGCTCTGCTGAGAGTCCAGGTTTAGCAGTGCTTGCTATAGCAGAGTTTCTTTCCGTTGCTGAGAAAAATGGGAAATCCATAACTGTTTCTTTCTATGAGGTTGATCATCAGGATCGGGCCATGGATTTATTAAAACCAGAGAAGCCGCCAATCTTGGTTTTAGAAGATCGTGGCCGAATTCAGTTTAAAGGGCTGACTCAGATTCCTGTGAAATCCGTCACTGAATTTCAGAATTTGTACTCCACTGCATGTTTTACCCTGAAGGGAGCTTCCAAAAAACGTGTTCATGGAAGTCATATGGGATTGATTGTGCATGTCTTTTCCCAGAATGAAAGTGTGAGAAGTATTGTGAGCAAAATTAATTTTGTTGACTTGGCAGGTTATGAAGATTCTAGAAAGAAAAGTAGTGATGGCTCCCGCCTAATTGAGATTAACAAAATGAACAAGTCAATTTATGCATTATTGAATATTTGTCATGCTTTGACTACAAATGAAAGTCGTATTCCCTACCGGGAAAGCAAGCTTACACGCATACTACAGGATTCTTTGAGGGGAACTAGCAAAATTTTATTGATTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTAAGCTTGGCATCACGGTCATGTCATCGGATTCAACATCAGGCATCCTTAGATTCCACCAAGAAAAATGTAACTTCAGCAAAACAGATGGTGAATTCTCATATGAAACAGATACCTACAAGTGTTTCTGGGACAGCAAAGAAATTACATGGTTCTTCTAAACTACTTGAAAAAAATGTTGTTTCTATTAAGTCTGCAATAAAAGGAAGGAAATTGTTTGATAAAGCTAGCCATTCCGTTGATAAGGTTGAGAAGGAAATTTCTGTTACTGATATTTCTCAAGCATCAAAGCCTTTGATGGATATCTCATTATGTGAGACTGGAAATCATGTCGTATTCAACTCTGGAATGGAAATGGATGACTCATTTGCAAAAGCTAGTCAGAACATGGAACCTTATCCGATGTTGGAAAATGTTGATTCATCTTTGAACGCTAGCAGTGAAGTGGAATTCAATCCCCTAGCAGCTAAGGATATTTTTGTGGATGGAGAGGATGGTCAGAAGGAGCATAATACCCCTCGTGGCAGTAATTGCGCAATGATAGTTCAGAAAGAGCATAGCTCACCACCCATCAGCTCACAGTTGCGTGATCTTTCTAATAATCTTAAAATGCTTAAAATGTTGTGTTCTTCAACTTCGACGTGCATGCAAATATCAGAAAAGGAACTCATTCCAGTTGATAGTGTAGAACCAAAAACTCCTACAATTACTCAAAACAGGAGCATTAACCCATGGGATGAAATGAATGGCAAAAGTCCCTGGGAGACATTCAGCATGCGAGGTTCTGGAATGAAGACTTCTATTGTTCAACAATACCTAAGATTTCTGAACACAGCTGAAAAGAACGAATTAAAAAGATTGAAGGGAATTGGAGAAAAGAGAGCTACCTACATACTTGAACTTAGAGAAGAATCTCCGGAACCTTTCAAAAGTCTGGATGATTTAAAGGACATTGGACTTTCGACAAAGCAGATTAAGGGAATGATGAAGAATGAGGTTGGAGAGCTTTTCAATGAATTGTAA 1974 0.4043 MDSKQLDRVGRKVRVVARIRGFSGPEANSEPGTARTVEWISVNGENSDDVSISFRDHSSRYLVDHCYKEDEDSEMIYSREVKPLVSAAFEGHNSTVIAHGARGSGKTHIIQGSAESPGLAVLAIAEFLSVAEKNGKSITVSFYEVDHQDRAMDLLKPEKPPILVLEDRGRIQFKGLTQIPVKSVTEFQNLYSTACFTLKGASKKRVHGSHMGLIVHVFSQNESVRSIVSKINFVDLAGYEDSRKKSSDGSRLIEINKMNKSIYALLNICHALTTNESRIPYRESKLTRILQDSLRGTSKILLISCLNPSFCQDTIYMVSLASRSCHRIQHQASLDSTKKNVTSAKQMVNSHMKQIPTSVSGTAKKLHGSSKLLEKNVVSIKSAIKGRKLFDKASHSVDKVEKEISVTDISQASKPLMDISLCETGNHVVFNSGMEMDDSFAKASQNMEPYPMLENVDSSLNASSEVEFNPLAAKDIFVDGEDGQKEHNTPRGSNCAMIVQKEHSSPPISSQLRDLSNNLKMLKMLCSSTSTCMQISEKELIPVDSVEPKTPTITQNRSINPWDEMNGKSPWETFSMRGSGMKTSIVQQYLRFLNTAEKNELKRLKGIGEKRATYILELREESPEPFKSLDDLKDIGLSTKQIKGMMKNEVGELFNEL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00709 657 Gene3D - 581 653 - -
Phco5g00709 657 Gene3D Kinesin motor domain 9 365 IPR036961 -
Phco5g00709 657 ProSiteProfiles Kinesin motor domain profile. 12 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phco5g00709 657 FunFam Kinesin-like protein KIN-10C 1 328 - -
Phco5g00709 657 SUPERFAMILY RuvA domain 2-like 586 642 IPR010994 -
Phco5g00709 657 FunFam Kinesin-like protein KIN-10C 579 653 - -
Phco5g00709 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 323 IPR027417 -
Phco5g00709 657 Pfam Kinesin motor domain 41 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phco5g00709 657 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 12 356 IPR027640 GO:0003777|GO:0007018
Phco5g00709 657 PRINTS Kinesin heavy chain signature 279 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phco5g00709 657 PRINTS Kinesin heavy chain signature 91 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phco5g00709 657 PRINTS Kinesin heavy chain signature 230 248 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phco5g00709 657 SMART kinesin_4 10 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phco5g00709 657 Pfam Helix-hairpin-helix motif 593 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00709 Phco-Chr5 7685267 7690818 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00709 5 7685267 7690818 Phco5g00709 5 7685267 7690818 ECH