Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00708 ATGGCTTCTGTCTCCCTTCTTCTCGCCCTGCTCGTGTTCTTCGTAATTGGCACTTCTCTTTCAAACAGAATGTTTATGTTGTTCACATTGTTAATTTGCATCAGCAGTAGGAAGGAATTAAGGAACAAGGAGAAAACTGCATTACAGATGTTAGAGCGCCAAGTTCATTATTCCAACAGTATTAACCCATCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTTTTTCTGTACAAAGGTTTTTTGTCTGACAAGGAGTGTGAATACCTTATTTCTTTGGCATATGCTGAGAAAGAAAAATCCTCAGGGAATGGTGGAACTTCCTTGGAGATGGAAGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAATTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTGCAGGTCATGCAATATGGGTCGGAGCAGAATGATCAAACCTTATATTATTTTACAAACAAGACCAATTTGGAATTGAGTGGACCTTTAATGGCAACAGTTGTTTTATATCTCTCAGACTCTACTCAAGGGGGTCAAATTCTCTTTCCTGAATCAGTGCCAAGGAGTAGCAGCTGGTCAAGTTGCAGTAACAGTAGTAAGACTATCCAACCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCAAGTGCTTCTCCTGACAAGAGTAGCTTTCATTCTAGATGCCCTGTGCTTCAAGGAGACATGTGGACTGCAATCAAATACTTCTATGCGAAAACAATTAGCAGAGGCAAGGTCTCAGCCATATTAGAAGATGATGAATGCACTGATCAAGATGACAGTTGTTCTGCATGGGCAGCCAAGGGAGAATGTCAAAGAAACCCTGTGTTCATGATTGGATCTCCTGATTATTATGGTACGTGTAGGAAAAGTTGTAATGCATGCTGA 921 0.4072 MASVSLLLALLVFFVIGTSLSNRMFMLFTLLICISSRKELRNKEKTALQMLERQVHYSNSINPSRVVQISWQPRVFLYKGFLSDKECEYLISLAYAEKEKSSGNGGTSLEMEDDILARIEERLSIWTFLPKENSKPLQVMQYGSEQNDQTLYYFTNKTNLELSGPLMATVVLYLSDSTQGGQILFPESVPRSSSWSSCSNSSKTIQPVKGNAILFFSLHPSASPDKSSFHSRCPVLQGDMWTAIKYFYAKTISRGKVSAILEDDECTDQDDSCSAWAAKGECQRNPVFMIGSPDYYGTCRKSCNAC 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00708 306 ProSiteProfiles ShKT domain profile. 266 306 IPR003582 -
Phco5g00708 306 SMART p4hc 73 248 IPR006620 GO:0005506|GO:0016705|GO:0031418
Phco5g00708 306 SMART ShkT_1 265 306 IPR003582 -
Phco5g00708 306 FunFam Probable prolyl 4-hydroxylase 12 65 248 - -
Phco5g00708 306 Gene3D q2cbj1_9rhob like domain 57 248 - -
Phco5g00708 306 Pfam 2OG-Fe(II) oxygenase superfamily 164 248 IPR044862 -
Phco5g00708 306 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 54 246 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00708 Phco-Chr5 7654755 7658070 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00708 5 7654755 7658070 Phco5g00708 5 7654755 7658070 ECH