Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00645 ATGCGAGTCTTCGCTTCTCGAACCTCCAACTTCTTCAAGCGCAATCTCGAGAATTTCCCATACAATTTCAACTTCTTCAGAGAACTCGCGCAATCCACCGCAATCCCCAAAAAACAACTTAGGGTTCGCGACCACGGCTACGACAACTACATGGAAGTGGAGAAGAAAACGCGCAAGGTCCTCAAATTTCAGAGCATCATCCTGTCCGAGCCCAGCCAATCGCTCCCAATCTCGCGCCTCGAAACCCTCGCGCGCCGCTTCGGCTTCACGCGCTACGAGGCGGGTGCGTTCATCCTCAAGTTCCCGCACGTCTTCGAAATCTTTGAGCACCCCGTCCAGCGCATCCTCTTCTGCCGCCTCACCCGCAAGGCGATCCTCCAGATCCAGCAGGAGCGCCACGCGCTCTTGGAGCAGATCCCATTCGCCGTCACGCGACTTCGGAAGCTTCTCATGATGTCGAACGAAGGCAGGCTCCGCCTCGAGCATGTACGCATCGCACGCGCCGCCTTAGGGCTTCCCGACGACTTCGAAAACTCGGTGGTTCTGAGGTACCCTCAGTTTTTCCGTTTGATTGATGCCAATGAAACTAGAATGAAGTACATTGAGGTTGTGGAGAGAGACCCTAGGTTAGGGACTTGTGAGATTGAGGAGGTTAGGGAGAGGGAGTATAGAGAGAGAGGTGGTGATGCTGAGGATATTAGGTTTTCTTTTGTGATTGATTTTCCACCTGGTTTTAAGATAGGTAAGTATTTTAGGATTGCAATGTGGAAGTGGCAGAGGGTTCCTTATTGGTCCCCTTATGAGAATGTTTCTGGGTATGATTTGAGGTCCATTGAGGCCCAGAAGAGGATGGAGAAGAGAGCTGTCGCCACCATTCATGAGTTGTTGTCGTTGACTGTGGAGAAGAAGATTACATTGGAGCGGATCGCACATTTCCGGATGGCGATGAACCTGCCCAAGAGGTTGAAGGATTTCCTGCTCCAGCACCAAGGTATTTTCTATGTCTCCACCAGAGGGAATCAGGGAAAGCTTCACACTGTTTTCCTTAGGGAGGCGTATAGGAAAGGCGAGCTGATTGAGCCGAATGAGTTGTATTTGGCACGGAGGAAGCTGGCTGAGCTTGTGCTGTTGAGTCCTCGGAAAGCCAAGGTTGATCAGGAGTTGGTTGGGTACAGGAGAAGCAGATTAGAGGACGAAATGGGGCAGGTAACGAGGACGTACGTGGAGGATTCTTGTGAAGATTTTAAGGGGGAAGATGGTATGAGTCTGGATAAGGATGCAGAGGATGATTTGACGTCAGATATAGGTTCTGATGTTGATTTGGGAGACGAGGGTGATGATTTCGTGGATAGTGTATCATTAGAGAGGACATCATAG 1377 0.5062 MRVFASRTSNFFKRNLENFPYNFNFFRELAQSTAIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQSIILSEPSQSLPISRLETLARRFGFTRYEAGAFILKFPHVFEIFEHPVQRILFCRLTRKAILQIQQERHALLEQIPFAVTRLRKLLMMSNEGRLRLEHVRIARAALGLPDDFENSVVLRYPQFFRLIDANETRMKYIEVVERDPRLGTCEIEEVREREYRERGGDAEDIRFSFVIDFPPGFKIGKYFRIAMWKWQRVPYWSPYENVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKRLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNELYLARRKLAELVLLSPRKAKVDQELVGYRRSRLEDEMGQVTRTYVEDSCEDFKGEDGMSLDKDAEDDLTSDIGSDVDLGDEGDDFVDSVSLERTS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00645 458 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 30 398 IPR045040 GO:0003723
Phco5g00645 458 MobiDBLite consensus disorder prediction 433 448 - -
Phco5g00645 458 Pfam Plant organelle RNA recognition domain 42 378 IPR021099 GO:0003723
Phco5g00645 458 MobiDBLite consensus disorder prediction 415 458 - -
Phco5g00645 458 MobiDBLite consensus disorder prediction 415 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00645 Phco-Chr5 6447130 6448506 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00645 5 6447130 6448506 Phco5g00645 5 6447130 6448506 ECH