Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco5g00624 | ATGATGAGGATGAGGAATAATAGTGGCAATAATAATCACAAGACAAATGGTCTTTCTTCCATCATGAATGCAGGAGGCTCAGCTGCTTGTAGATCTGAGCCTGGTTCAAAGGAATGGGAGATGAGACCAGGTGGAATGCTGGTTCAGATGAGAACCGCTGATTCGGATCGGAACCCAGTACTTGTTCCCACAATTAGAGTTAGGGTCAAGTATGGTTCAATTTACCATGAAGTAAACATTAGTTCTCAAGCTACATTTGGGGAGTTGAAGAAGATGTTGTCAGGACTAACTGGATTACACCATGAAGACCAAAAGCTGTTTTACAAAGACAAGGAGAGGGATTCAAAGACTTTTCTTGACATGGTTGGGGTCAAGGATAAATCCAAGATAGTGTTAGTGGAAGACCCTATTAGTCAAGAGAAGAGGTTGTTAGAGATAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAATCGATCTCAGCAATCAGCTTGGAAGTAGACAGGCTTGCAGGGCGGGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTGGTGGAAACAGATGTTCTAAATCTGATCGAGTTGTTGATGAACCAATTGCTTAAATTGGACGGTATAACGGCTGATGGGGATGTGAAATTACAGAGGAAAATGCAGGTAAAAAGAGTTCAAAAGTATGTTGAAACTCTTGATTTGCTGAAGGTTAAGAATTCTGTGCCTAGTAGCAATGGAGACAGTGCTCCAGTGCAGCCTCAACAGAAGCATTCAAATGTGCAGAGGTTGGGAGCTGTTCAAGAGAAACAACAAAAGCATTCAAATGGACATAATAGGTTAGCCTTAGCACCAATTCAAGAACAGCAACAAGAAGAACCTAGGAACTCAAATGAGAATTCTCTAGCACTTTACCAAGAACAACAACACCAAACCTCAAGAAATTCTACCTCAGAAGTTGTAGTTACCACAAATTGGGAGTTGTTTGATCCTGCCCCACCATTAATCCCTGTGCAATCCACATCCCCACCCCAACCCCCCTCAGTGACTAATAATTCAGCTCCTCCTAAGTTCAATTGGGAATTCTTCAACTAA | 1092 | 0.4185 | MMRMRNNSGNNNHKTNGLSSIMNAGGSAACRSEPGSKEWEMRPGGMLVQMRTADSDRNPVLVPTIRVRVKYGSIYHEVNISSQATFGELKKMLSGLTGLHHEDQKLFYKDKERDSKTFLDMVGVKDKSKIVLVEDPISQEKRLLEIRKNAKMEKAAKSISAISLEVDRLAGRVSAFESIISKGGKVVETDVLNLIELLMNQLLKLDGITADGDVKLQRKMQVKRVQKYVETLDLLKVKNSVPSSNGDSAPVQPQQKHSNVQRLGAVQEKQQKHSNGHNRLALAPIQEQQQEEPRNSNENSLALYQEQQHQTSRNSTSEVVVTTNWELFDPAPPLIPVQSTSPPQPPSVTNNSAPPKFNWEFFN | 363 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco5g00624 | 363 | SUPERFAMILY | Ubiquitin-like | 54 | 139 | IPR029071 | - | |
| Phco5g00624 | 363 | Pfam | Ubiquitin family | 75 | 133 | IPR000626 | GO:0005515 | |
| Phco5g00624 | 363 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 30 | - | - | |
| Phco5g00624 | 363 | Gene3D | - | 64 | 134 | - | - | |
| Phco5g00624 | 363 | MobiDBLite | consensus disorder prediction | 239 | 271 | - | - | |
| Phco5g00624 | 363 | MobiDBLite | consensus disorder prediction | 239 | 276 | - | - | |
| Phco5g00624 | 363 | Pfam | BAG domain | 159 | 234 | IPR003103 | GO:0051087 | |
| Phco5g00624 | 363 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Phco5g00624 | 363 | SMART | BAG_1 | 158 | 236 | IPR003103 | GO:0051087 | |
| Phco5g00624 | 363 | CDD | Ubl_AtBAG1_like | 64 | 133 | - | - | |
| Phco5g00624 | 363 | ProSiteProfiles | Ubiquitin domain profile. | 63 | 133 | IPR000626 | GO:0005515 | |
| Phco5g00624 | 363 | FunFam | BAG family molecular chaperone regulator 1 | 63 | 134 | - | - | |
| Phco5g00624 | 363 | PANTHER | BCL2-ASSOCIATED ATHANOGENE | 20 | 329 | IPR039773 | GO:0051087 | |
| Phco5g00624 | 363 | SUPERFAMILY | BAG domain | 118 | 240 | IPR036533 | GO:0051087 | |
| Phco5g00624 | 363 | Gene3D | BAG domain | 135 | 240 | IPR036533 | GO:0051087 | |
| Phco5g00624 | 363 | FunFam | BAG family molecular chaperone regulator 1 | 133 | 240 | - | - | |
| Phco5g00624 | 363 | ProSiteProfiles | BAG domain profile. | 158 | 236 | IPR003103 | GO:0051087 | |
| Phco5g00624 | 363 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco5g00624 | Phco-Chr5 | 6215272 | 6216883 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco5g00624 | 5 | 6215272 | 6216883 | Phco5g00624 | 5 | 6215272 | 6216883 | ECH |