Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00622 ATGTGTCATCCAACTCTTGACGTCACCTGCAAATGCTGCTGCACCACTTCACCTCCTGATTACCAAATTTCAATCAAGGACTCAGAAGAGCAGCACCCCATAATGCTCACCAACCCTTTGATCTCCAAACTCCAAAACAACACAACACCACCACCACCTCAACTTAACACATCAACAACACCTTCACCACCACCACAACCGATAAAAGCTGTAACAGAAGCAGCAAAATCACATCTCCCTGACACCATCAATGAAGTGATTTCCATATCCAAAATAGCCATCCCTATGATCCTTACTGGTCTCCTCCTCTACTGCCGCTCCATGATCTCCATGCTCTTCCTTGGCCACCTTGGAGAGCTTGCTTTGGCAGGTGGCTCACTGGCTGTTGGCTTTGCCAACATCACTGGCTACTCAATCCTGTCTGGTCTTGCTGTAGGAATGGAACCAATCTGTGGCCAAGCTTTTGGTGCCAAGAGGTTCACCCTCCTTGGCCTCTGCTTGCAAAGAACCATTCTTCTTCTCCTCTTCACTTCCCTCCCCATATCACTCCTTTGGCTCCACATGAAGAAAATTCTTCTCCTTTGTGGCCAGGATGAGGCCATGGCCACACAAGCCCAATCATATCTTGTTTACTCCATTCCTGACCTCGTAGCACAATCTTTCTTACATCCTTTGAGAATTTACCTTAGGAGCCAATCCATTACCCTCCCTCTCACCCTCTGTGCCTCCTTGTCAATTCTCCTTCACATACCCATCAACTACTTTCTTGTGTCTCACCTCAGGCTGGGAATCAAAGGGGTGGCTCTTGGTGGGGTGTGGACAAACTTCAACCTTGTGGCTTCTTTGATTCTTTATATAGTCTTCTCTGGCACTCATAAGAAAACATGGGGTGGTTTCTCTTTAGAGTGCTTCACACAGTGGAAGTCTCTTCTCAATTTGGCTATTCCAAGCTGTGTTTCAGTGTGCTTGGAATGGTGGTGGTATGAGATCATGATTTTGTTATGTGGGCTGTTGGTGAACCCCAGGGCAACTGTGGCTTCAATGGGAATTCTGATCCAAACCACTTCTTTGCTTTACATTTTCCCTTCTTCATTGAGCTTCAGTGTGTCAACTAGAGTTGGCAACAAGCTTGGCGCACAGAAACCCTCAAAGGCAAGGCTTTCTGCCATTGTGGGGTTGTCTTGCAGTTTCGTGTCAGGTGTCCTGGCATTGTTTTTTGCTCTCATGGTCAGGAACACATGGGCTAGCATGTTCACAAAGGACAAAGAGATAATAAATTTGACATCTATGGTGTTACCCATAATAGGCCTTTGTGAGCTTGGGAATTGCCCTCAAACAACAGGGTGTGGGGTGCTGAGAGGCACAGCAAGGCCTAAAGTTGGTGCTAACATCAACTTGGGATGTTTCTACCTTGTGGGAATGCCTGTGTCCATTTGGCTAGCTTTCTTCTCTGGCTATGATTTTCAAGGCCTCTGGCTTGGCCTTCTTGCAGCTCAAGGGTCTTGTGCAGTGTCCATGTTGGTTGTTCTGTGCAGAACTGATTGGGAATTTGAAGCCCAAAGAGCCAAGAAACTCACGGGAATGGGAGGAGCTTCTAGTGTTGACGATCACAACCATGAGGGTGATCCAGAGAAGCCACTCAAATTTGAAAGCAAGGAAGATTCTTTGGCATTATTAGCTGACTCAGATGAAAATGAACAGTGA 1704 0.4671 MCHPTLDVTCKCCCTTSPPDYQISIKDSEEQHPIMLTNPLISKLQNNTTPPPPQLNTSTTPSPPPQPIKAVTEAAKSHLPDTINEVISISKIAIPMILTGLLLYCRSMISMLFLGHLGELALAGGSLAVGFANITGYSILSGLAVGMEPICGQAFGAKRFTLLGLCLQRTILLLLFTSLPISLLWLHMKKILLLCGQDEAMATQAQSYLVYSIPDLVAQSFLHPLRIYLRSQSITLPLTLCASLSILLHIPINYFLVSHLRLGIKGVALGGVWTNFNLVASLILYIVFSGTHKKTWGGFSLECFTQWKSLLNLAIPSCVSVCLEWWWYEIMILLCGLLVNPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQKPSKARLSAIVGLSCSFVSGVLALFFALMVRNTWASMFTKDKEIINLTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVSIWLAFFSGYDFQGLWLGLLAAQGSCAVSMLVVLCRTDWEFEAQRAKKLTGMGGASSVDDHNHEGDPEKPLKFESKEDSLALLADSDENEQ 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00622 567 MobiDBLite consensus disorder prediction 42 66 - -
Phco5g00622 567 Pfam MatE 95 255 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco5g00622 567 Pfam MatE 316 478 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco5g00622 567 MobiDBLite consensus disorder prediction 535 559 - -
Phco5g00622 567 MobiDBLite consensus disorder prediction 527 567 - -
Phco5g00622 567 CDD MATE_eukaryotic 85 521 IPR045069 GO:0042910|GO:1990961
Phco5g00622 567 PANTHER MULTIDRUG RESISTANCE PROTEIN 82 515 - -
Phco5g00622 567 NCBIfam MATE family efflux transporter 95 492 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00622 Phco-Chr5 6166984 6168687 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00622 5 6166984 6168687 Phco5g00622 5 6166984 6168687 ECH