Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00604 ATGGGTAAGGAGGGGTATTTTGCTGGAAGAACATCAAAGAGAGGTGTTGTAGTTGGAGGAGGAAGAGGAGGTGATGCTGAAACACAAGTCCCTTCTGGTTGCATGAGTGCTGTTTTTCAGTTCTTTGATTTCCACCCCTTTCATTTTCCCAACATAAACCAACAACAAACCTCTTTCAAACCACCCTCATGCACTTTAGAAGACCATACCACAGTCTCCAAAGGTGCTGAAGCACCTAGGAACAGCTTGGAATCAGAGGATGGTGATGGTCCTGTTTCATCTCTCTCATCAAAAGAAGAAGATTTTAAAATTCCTAAGAATATTATACAAATTAAGACAAGTGGAGGCACAAGAACAGGTGGTGGAAATTTGAATGACTTGTCTGCAGAAATCACCAGCTCACCAGGGACAAAGACACCAACTTTGGTGGCCCGGTTAATGGGTTTGGATCTTCTTCCAGGGACACACTCACCCTCTTTTTCTCCTTCTTCTTCATGTCTTTCCGCTCCGAACACTCAAGGCAATGCGCCACATCTGCACCACCACCCGAGGCACAAGCAACATGTCCAAACCAAGCATAGAAACAGCATAGACAGCAGTGACATTGCAGCCACGAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGTTGATTACCACCACAGATTCTCACTCCAAATCAACAAGGAAAACTTGAATCTTGGTGAGGATTTGGAGCTGCCTAGGCTCTCGTTTTCAAAAAGAAAGTGTGATGAGAACAATGGCAGGAGTCCAAGCAACTATGCCAGGCAAATAGTCAAACAGGTTAAGGAAAGTATGGGCAGAAAAGTTGGCCAAGACATCACCAACACGCTCAAAACAAGAGAAGAAATTGTAGGCCAACTCAAAAGCAAAAAATCTTCCAAAACATCATCACTGAAAGCAATTGATGAAACTGAAACTAGCCCACTGAAAGCACACTCAAACACATCTTCCTATTCCCCAAGGCTTAGATTCCTTGACAAGCACAAACCAACCACACCAACGCCACTCACCCCAAAAGACCAAAACATGCTTAAACTACCACCACCTCCTCCTCCAGTTAACACTCAGCTTCCAAGAGTTTTAACAAAACCAAAGCCTCAAGCATTATCGTTGCCAGAGCAGAAAGATTTTCATGAGAACAGCACATCTGTCCCAAAATGCAAAAGGGCTACCAATGAAAAGTTCAACTCAAGGCTCAAAAGGCCTCCACAGACATCGGACATAATAAGAAACAAACAAGAAGAATCATTCATCATTCGTCCCACATCGCCTACCAGAGCCAGTGACACCAAAACCTCTAAAAGCAAGAAAACTCATCCATTGTCAAGTAATCTCCTCAACAACATCAACACTGTACCAAATCTTCTTCCTGTCAAGACAGATCCTTCTCCTCCAGCAACCAAAATCCCTCCAAAACAGTCACAGGTGTGTGATAGTCAAGAGTCCAAAAGCAGCTCACAGTTATCTAGTTGTTCGCGCCAGAGGTACAAACAAGAAGGAACAACCACACTCGCCACCCGAGAAACATCACAGAACAAACCTAACAGTGCTTCCGCCACCATTGGAGCACCCCAACCTTTCTCTCACTCTCACACTCCACAAGAGCTTCACTACATCACAGCAATCTTAGCCCGTACAAATGCCCTAAACGTAGAGGACACCCCCACAAATCCCATATTACTGCCCCTTCACCACCCCAGGTTCTCCCCAACCCATCCACTTGATCCATCAATCTTCCTCCACCTCGAACACCTTGCCGTCAACAAAGATCTTAGCTTTTCCCCAAAAGAACAACTGGGTCACCATTGGAATAGGAAGTTATTGTTTGATCTGGTGGACGAGGTTCTGAAGGAGATTCTGCAAGAGAGTGGGAAGAAGAGACTTTGGTTTCCGCATGGTGTTGCTGGTTGTTGGCACAGTGGGAGCGTTGTGGAGAGGGTGTGGAAGAGGGTGGGGGAGTTCCCACGTGCTAAATGTGAGGTGTTGGAGGACATTGATGGATTGATTGAGGGAGAGGACATGGAGAGAGAGAAGGATGGTGAAAGGTTGGAGGAAGAAGGAGAAGGGTTGGTGGCAGAGATTGAAGGGAACATATGGGACACGTTAGTGCATGAAACGGTTATGCTTATAGATTGCTTGGGAAATGTGAGAAAAGATAAGTTCTTAGATGATGTGAAAATATCACATGTTTGTACTGTCTCTCAATTTTAA 2250 0.4502 MGKEGYFAGRTSKRGVVVGGGRGGDAETQVPSGCMSAVFQFFDFHPFHFPNINQQQTSFKPPSCTLEDHTTVSKGAEAPRNSLESEDGDGPVSSLSSKEEDFKIPKNIIQIKTSGGTRTGGGNLNDLSAEITSSPGTKTPTLVARLMGLDLLPGTHSPSFSPSSSCLSAPNTQGNAPHLHHHPRHKQHVQTKHRNSIDSSDIAATRSLPETPRISSARRSDVDYHHRFSLQINKENLNLGEDLELPRLSFSKRKCDENNGRSPSNYARQIVKQVKESMGRKVGQDITNTLKTREEIVGQLKSKKSSKTSSLKAIDETETSPLKAHSNTSSYSPRLRFLDKHKPTTPTPLTPKDQNMLKLPPPPPPVNTQLPRVLTKPKPQALSLPEQKDFHENSTSVPKCKRATNEKFNSRLKRPPQTSDIIRNKQEESFIIRPTSPTRASDTKTSKSKKTHPLSSNLLNNINTVPNLLPVKTDPSPPATKIPPKQSQVCDSQESKSSSQLSSCSRQRYKQEGTTTLATRETSQNKPNSASATIGAPQPFSHSHTPQELHYITAILARTNALNVEDTPTNPILLPLHHPRFSPTHPLDPSIFLHLEHLAVNKDLSFSPKEQLGHHWNRKLLFDLVDEVLKEILQESGKKRLWFPHGVAGCWHSGSVVERVWKRVGEFPRAKCEVLEDIDGLIEGEDMEREKDGERLEEEGEGLVAEIEGNIWDTLVHETVMLIDCLGNVRKDKFLDDVKISHVCTVSQF 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00604 749 MobiDBLite consensus disorder prediction 387 403 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 53 99 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 410 442 - -
Phco5g00604 749 Pfam DUF761-associated sequence motif 128 157 IPR032795 -
Phco5g00604 749 MobiDBLite consensus disorder prediction 450 470 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 196 214 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 302 334 - -
Phco5g00604 749 Pfam Domain of unknown function (DUF4378) 548 718 IPR025486 -
Phco5g00604 749 MobiDBLite consensus disorder prediction 156 175 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 155 220 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 483 544 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 355 370 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 53 78 - -
Phco5g00604 749 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 723 - -
Phco5g00604 749 MobiDBLite consensus disorder prediction 297 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00604 Phco-Chr5 5881592 5884654 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00604 5 5881592 5884654 Phco5g00604 5 5881592 5884654 ECH
Phco5g00604 5 5881592 5884654 Phco6g02535 6 46886877 46890187 PCT