Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00594 ATGTCCCTCTTCTCTTTCTCACATTACAAATTCTTTTGGAGATCTTCAATTGCAGTTGCATTTTTCTTAACCCTTCTCTTCATTGCAAACTCACTCACTCTCCAAACCCAATCCACTTCAACCCCATGCAACAAAGACCCCTACAAGCAACTCAATCTAATCCTTAACCAAAACGGCACCGTCACACGCCCCAATAAACCCCCAGACAGCCCACCCGCAGCAGATCCCACTCTCCTCGTACTCTCCAAAGACCTCCCCATCAACCAATCAAAGGGCACATGGGCGCGGGTGTACCTCCCCCGCGTAGCACGGGATCACCGCTCCAAGCTCCCCTTACTGGTTTTCTTCCATGGTGGAGGGTTCATTTTCCTCAGTGCAGCCTCAACGATTTTCCACGAGTTTTGCTTCAACATGGCAAACAACGTCGCTGCGGTCGTAGTGTCCGTGGAGTACCGTCTCGCACCGGAACATAGACTCCCCGCGGCGTACGACGATGCCGTGGAGGCGCTGCACTGGATCAAAGCCAACCAGGATGACTGGCTGAAAAACCTCGTCGATTACTCCAACGTTTTTCTCATGGGGAGTAGTGCCGGGGGAAACATCGCCTACAACGCCGGTCTACGTGCAGCTGCGGCTGATGATGATGAGATTACCAAGATCAAAGGGCTTATTTTGGTTCAACCCTTTTTCAGTGGGACCCGCAGGACAGGTTCGGAGCGGAGGCTCGTGAACGAACCTCATTTGGCGCTGTGCTTTAATGACGCCATGTGGGCCTTGTCGTTACCCGTTGGGGTTGACCGTGATCACGAGTATTGCAATCCGACGGTGGGGAATGGTCCTGGTAGATTGGAAATAATCGAAAGGCTTGGATGGTGGGTACTGGTTACCGGGTGTGGCGGTGACCCACTAGTGGATCGTCAGGTGCAGCTGGTTAAGTTGATGGAAAAGAAGGGTGTGAGAGTTGTGGGGCATTTCAGTCCAGGGGATTATCATGGGATTCAAGATAGTGATCCATTGAAGGCAAAGGTGCTATTTGGGGTAATCAAAACTTTTATTTCAGCTTTAAATTAA 1071 0.5107 MSLFSFSHYKFFWRSSIAVAFFLTLLFIANSLTLQTQSTSTPCNKDPYKQLNLILNQNGTVTRPNKPPDSPPAADPTLLVLSKDLPINQSKGTWARVYLPRVARDHRSKLPLLVFFHGGGFIFLSAASTIFHEFCFNMANNVAAVVVSVEYRLAPEHRLPAAYDDAVEALHWIKANQDDWLKNLVDYSNVFLMGSSAGGNIAYNAGLRAAAADDDEITKIKGLILVQPFFSGTRRTGSERRLVNEPHLALCFNDAMWALSLPVGVDRDHEYCNPTVGNGPGRLEIIERLGWWVLVTGCGGDPLVDRQVQLVKLMEKKGVRVVGHFSPGDYHGIQDSDPLKAKVLFGVIKTFISALN 356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00594 356 Gene3D alpha/beta hydrolase 48 355 IPR029058 -
Phco5g00594 356 Pfam alpha/beta hydrolase fold 113 333 IPR013094 GO:0016787
Phco5g00594 356 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 113 129 IPR002168 GO:0016787
Phco5g00594 356 SUPERFAMILY alpha/beta-Hydrolases 67 339 IPR029058 -
Phco5g00594 356 PANTHER ARYLACETAMIDE DEACETYLASE 55 332 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco5g00594 Phco-Chr5 5715156 5716226 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00594 5 5715156 5716226 Phco6g02545 6 47001248 47002264 PCT
Phco6g02544 6 46998412 46999431 Phco5g00594 5 5715156 5716226 PCT