Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00584 ATGAGATTCTTGGAATTTCATTGTGATCCAATGTCTGCAATTGCAACCTTTGCAGCTATAGCTCTAACAGTCTTCATCATATTCAGAAGTTTCAAACACAAGAAAGGAAGGTACCATGTGGTTGCGGGAACTATGTTAGACCTGTTGTTCAACTTCCAAAGTCTGCACGATTACATGACTGGTCTTGCCAGAAAATACAAGACTTACCGGTTGCTTGGGTTTCACAGGAGTGAGGTTTACACAGTGGACCCTGTCAATGTTGAATATATCCTCAAAACAAACTTTGCAAACTATGTGAAGGGCTGGTACCACTATGAGAAATTGACAGATCTTTTAGGTGATGGAATATTCACAGTGGACGGCGAGAAGTGGCTACATCAGAGAAAGGTTTCGAGCTATGAAATTGGCACCAAAGCAGTGAGAGATTTTAGCCTTCAAGTGTTCAAATCCAATGCAGTAAAACTTGCAGGAGTTGTTTCAAAAACAGCTATGTCAAATAATCCAGTTGACTTCCAAGAACTGTTTATGAAATCAACCTTAGACTCAGTCTTTAAGATTGTCCTTGGTGTAGACTTGGACACCATATACGGAACATACGAAGAGGGCACTGAATTCTCCAATGCCTTTGATGAAGCAAGTGCTATAACGTTGTATCGGTATGTTGATGTTTTCTGGAAGATCAAACGTTTTCTCAACATTGGATCAGAGGCAGTACTTGGAAACCTTATTAAAGTGGTGGATAATTTTGTTTACAAACTAATCAGAATTAAGATAGAGCAAGTACAAAAGTCACAATACGATTTTCCTGAGAAAAAAGCAGATATGGTATCAAGGTTTCTAGCATTGAATGAGACAGATCCCAAGTACCTAAGAGACATTATTCTCAGCTTCGTGATTGCAGGAAGAGATACAACAGCTGCTACCCTTTCCTGGTTCTTTTACATGCTATGCAAGCATCCTCATATCCAAGAAAAAGTTATGCATGAAGTTGGAGAAGTAACAAAGTTGAAGAACACTTGTAATATTGATGAACTAGCAGATAGCCTAACCGATGAGGCCCTGGAAAAAATGCACTATTTGCATGCAGCTTTAAGTGAAACCCTCAGACTTTACCCTGCGGTTCCAGTGGATGGCAAACTTTGCTTATCAGATGAAACTTTGCCTGATGGATTTACCATTAGGAAAGGTGATTCTATAGCATATCAGTCATATGCCATGGGTAGGATGGAATTCATCTGGGGTGAAGATGCAGAGGAATTTCGACCAGAGAGATGGCTTGATGAAAGAGGAACTTTCCAACCAAAGAGTTCTTTCAAGTTCACAGCCTTTCAGGCCGGTCCAAGAATTTGTCTGGGGAAAGATTTTGCATATAGGCAAATGAAAACTTTTGCTGCTGTTCTTTGTCACAGCTACAAATTCAAGCTGGCTGCCCAAAATGAATCAGTGAATTATAAGACTATGCTCACTCTTCACATTGATGGTGGCCTTCATCTGCATGCTTATCAAAGATTTGAGCCTATATGGGTTAGAAGTTGTGGCTTCTAA 1545 0.4 MRFLEFHCDPMSAIATFAAIALTVFIIFRSFKHKKGRYHVVAGTMLDLLFNFQSLHDYMTGLARKYKTYRLLGFHRSEVYTVDPVNVEYILKTNFANYVKGWYHYEKLTDLLGDGIFTVDGEKWLHQRKVSSYEIGTKAVRDFSLQVFKSNAVKLAGVVSKTAMSNNPVDFQELFMKSTLDSVFKIVLGVDLDTIYGTYEEGTEFSNAFDEASAITLYRYVDVFWKIKRFLNIGSEAVLGNLIKVVDNFVYKLIRIKIEQVQKSQYDFPEKKADMVSRFLALNETDPKYLRDIILSFVIAGRDTTAATLSWFFYMLCKHPHIQEKVMHEVGEVTKLKNTCNIDELADSLTDEALEKMHYLHAALSETLRLYPAVPVDGKLCLSDETLPDGFTIRKGDSIAYQSYAMGRMEFIWGEDAEEFRPERWLDERGTFQPKSSFKFTAFQAGPRICLGKDFAYRQMKTFAAVLCHSYKFKLAAQNESVNYKTMLTLHIDGGLHLHAYQRFEPIWVRSCGF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00584 514 PANTHER CYTOCHROME P450 27 496 - -
Phco5g00584 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 CDD CYP86A 67 496 - -
Phco5g00584 514 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 Pfam Cytochrome P450 42 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00584 514 Gene3D Cytochrome P450 37 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00584 Phco-Chr5 5541013 5543724 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00584 5 5541013 5543724 Phco5g00584 5 5541013 5543724 ECH
Phco5g00584 5 5541013 5543724 Phco6g02553 6 47086319 47089918 PCT