Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00572 ATGACGACGGCGACTATCGGCCCAAAGGAGCGACGGGCATTTGGGCTCTGGTGCTGCGTTGTGTGCCTCGCGATCTGCGCCAGCGTTTGCGGCGCGGCCAGATCCGACAAGGAAACGCGGGAGAGGTTCTACGGAAACATAGTCAATTTGACGTCGCCCGAATCCAACAACACCTTGGCCAAAATGTTCGATCGCGTTCTCGAGAAGGAGTTTTCCGAGAATGACCAAACAGAAGAATCTGACAAAAGCAGCTTCAATAGCAGTGTAGCTGATCAGCAGGCTGTATTGGAGACTGTAGCTAAAATTACCCATGAGAAAGCAAAGAGAAATGATACACATGAGGGAAATGCCACAAGAGCATTTCAGTTTCATGATGTGTTCTCACTGGAAAATGAAGATTCCGATGATGTGACAACTTTGATTGATAAAAAGGACAATGTATTCGTCATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGCTAATATCGGATTTGGTGGTTGTAATAGTTTCTGCAGCCATTGGTGGGATTGCCTTTTCTTGTTTGGGGCAACCGGTTATCGTTGGCTATCTTCTTGCAGGCTCCCTTATCGGACCTGGCGGTTTGAAATTTATTAGTGAAATGGTGCAGGTTGAGACTGTTGCGCAATTTGGTGTTGTGTTTCTTCTCTTTGCTTTGGGACTGGAGTTTTCCCTGGCAAAGTTAAAAGCAGTGGGGGCTGTTGCTGTTCTTGGAGGGCTACTTCAAATTGTCATTTTTATGTTCATGTGTGGCATTCTTTCAATGTTATTTGGAGCCTCATTGTCTGAGGGTGTTTTTGTGGGTTCCTTTCTGTCAATGTCATCAACAGCAGTAGTGGTGAAGTTTTTGGTGGAGCGAAATAGTAATAATGCTCTTCATGTTCAAATTACAATTGGAACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGCCTTTTACAAGGAATAATGTCAATGGGGAAACTGCTGCTAGTGTTGTCATTGTATATCACAGCTACATCTATATTGTCATGGTCATTTGTTCCTCGATTTCTTAAACTGATGATGCGGTTGTCATCTCAGACTAATGAACTTTATCAGCTAGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTTGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCGACAACAGACTTTGCTCAACATACTTTGGACCAGGTGGAACCAATTCGTAACCTATTTGCAGCTCTCTTTCTCTCAAGTATTGGAATGCTTATACATGTGCATTTCCTTTGGAACCATGTGGATATCCTTCTGGCATCTGTTATTCTGGTTGTAGTCGTCAAAACTGCCGTGGTTGCTATAGTTACCAAGGCCTTTGGTTATAGCCTTAAGACGGCATTTATTGTTGGTATCTCACTTGCCCAAATTGGTGAATTTGCTTTTGTTCTCCTGAGTCGTGCATCAAATCTTCACCTTGTTGAGGGGAAAATGTATCTTCTTCTTCTAGGGACAACGGCTCTCAGTCTGGTTACAACTCCACTTTTGTTTAAATTGATACCTGCTGTCATGAATCTGGGTATTCTCATGCACTGGTTCCCCTCTGAAAGTACCGCACAAATTGAGGGGAAAGTATCAGTGATTGAAGCAAACAGAATGTTGTGA 1731 0.4327 MTTATIGPKERRAFGLWCCVVCLAICASVCGAARSDKETRERFYGNIVNLTSPESNNTLAKMFDRVLEKEFSENDQTEESDKSSFNSSVADQQAVLETVAKITHEKAKRNDTHEGNATRAFQFHDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIAFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGAVAVLGGLLQIVIFMFMCGILSMLFGASLSEGVFVGSFLSMSSTAVVVKFLVERNSNNALHVQITIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIMSMGKLLLVLSLYITATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVVVVKTAVVAIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGILMHWFPSESTAQIEGKVSVIEANRML 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00572 576 Pfam Sodium/hydrogen exchanger family 171 540 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Phco5g00572 576 Gene3D - 164 547 IPR038770 -
Phco5g00572 576 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 19 570 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00572 Phco-Chr5 5419879 5435243 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00572 5 5419879 5435243 Phco5g00572 5 5419879 5435243 ECH