Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00557 ATGCCCCAAAACGACATCCACTCCCACCAAAACGGTGAAACCACCGTCACCACCCCGCTCCACCCTCCACTTCTGACCCTCCACCTCCAAGCCATGACCTCCACCACTTCAACCTCCACCGACCCCCTCCCATCAGACGACGGCGCTGCGGTCAGGGCAGTCAACAAACGCTTCGAGGGCCTCCTCACTGTCCGGACCAAGGCCATCAAAGGAAAGGGAGCCTGGTACTGGGCCCACCTCGAGCCCATACTCGTCCCTCACCCAGATACCGGTCTCCCCAAATCCGTCAAACTCAAATGCTCCCTCTGCGACTCTCTCTTCTCCGCTTCAAACCCTTCAAGAACAGCTTCCGAACACTTAAAGCGTGGAACTTGCTCCAACTTCAGCTCTGGGTTGAGACCCGGCTCTGTACCTTCTCCCCTACCCATTTCCTCCATCACTCCCGGTTCCAACCGCAAAAGGGGTTCGCCTCAAATGGGTGCCACGTCACCCTCTTCTTATCAAAATCACTCCTTGGCCATGGTCGAGTCTTCCCGGTTCGACATCGGGTACACCCAGATGCAGAACAGTAACAACAACAGCAATAGTAATAATAATAATAATAACAACAACATTATGCACTTGCAGCATCACGGGCAGAGCCAACAGCATTTAATGTTGTCGGGTGGGAAGGATGATTTGTGTGCTTTGGCCATGTTTGAGGACAGTGTGAAGAAGTTGAAGAGTCCCAAGACTTCTCCTGGTCCTGCTTTGAGCAAGGACCAGGTGAATTCTGCTTTGGACTTGCTCTTCGATTGGTTCTATGAGACTTGTGGTTCTGTGTCCTTGTCCAGTCTGGAACATAGAAAGTTTCAGGCTTTTTTGAGCCAGGTTGGGTTGCCCGGCAATTTGAGGAGGGAGGTTTCTGGGGGGAGGCTTGATGCTAGGTTCGGGGAGGCCAAGGCTGAGTCCGAGGCAAGGATTAGGGACGCCATGTTTTTTCAGTTGGCGAGTGATGGGTGGAAGAGTGGGGGTTTGTTTAGCTTTAACTCGTGTTGTGGTGGGGGGGAGAGTTTGGTGAAGTTTGTGGTGAATCTCCCCAATGGGAGTAGTGTGTTTCAGAAGGCTGTGTTCACTGGTGGAGTGGAGAATTCTAAGTATGCCGAGGAGGTTTTGTGGGAGACGGTTACGGCGGTTACTGGGAGTGTTGTCCATAGGTGTGTGGGGATTGTCGCAGATAAGTTCAAGGCCAAGGCGTTGAGGAACTTGGAGGCACAGCACCATTGGATGGTGAACACTTCCTGCCAGCTTCAGGGGTTGGTTAGCTTGATCAAGGATTTTAACCGCGAGTTGCCGCTTTTCAGGGCTGTGATTGAGAATTGCTTGAAGGTTGCCAATTTCATGAACAGTGAGTCCCAGGTGAGGAGTCTTTTCCTCAAGTGCAGGGTGCAGGAGATGGACTGTGGTGGGCTAATTCGCGTGCCTTCACCCAAATGTGATCCACTGAAGAATTTTCAATTGGTGTTTCCTATGTTGGAGGACATTTTGAGCTGTGCCAGAGTGATACAGATGGTGGTGATGGAAGATGGGTTTAAAGTGATGTGTATGGAAGATACGTTGGCGAGGGAGGTTGCAGGAATGGTACAGAATGAGGGGTTTTGGAACGACTTGGAGGCGGTTTATTCAGTTGTGAAGCTTGTTAGAGGGATGGTGCATGATGTTGAGGCCGAGAGGCCATTGATTGGTAGGTGTTTGCCTCTCTGGGAGGAGCTGAGGAGCAAGGTGAAAGAGTGGTGTGGGAAGTTCAACATTGTGGAAGGACCTGTGGAGAAGATAGTTGAGAAGAGGTTTAGGAAGAATTATCACCCTGCATGGGCAGCAGCGTTTATACTTGATCCACTTTACTTGATTAAGGATGCAAGTGGAAAGTATCTTCCTCCGTATAAGTGTTTGACGCGAGAACAGGAGAAGGATGTGGACAAGTTACTCACGAGGCTGGCTTCGCGAGAAGAGGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGGTCAGATGGTCTTGATCCGCTTTATGCGCAGGCTGTTCAGATGAAGCAGAGGGATCCGATAACAGGGAAGATGAAAGTTGCAAATCCATTGAGTAGTAGACTTGTGTGGGAAACATGTTTGAGTGAGTTTAAATCCCTGGGGAAGATTGCAGTGAGGCTTATTTTTCTGCATGCAACTTCATGTGGGTTTAAGAGTAATTGGTCTTTTATGAGGAAATTTTCAGCTAATAAACAGTCAAGAGTTGCCTTGGAGAGGACTCAGAAAATGATATATATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCCAGTGAGGAAGAGAAGGATGCAGAGCTGTTTGCCATGTCTGGTAGTGAGGATGGCATGCTGGCTGAGGTTTATGCTGATGCTCCCTTAGTGTAA 2433 0.4957 MPQNDIHSHQNGETTVTTPLHPPLLTLHLQAMTSTTSTSTDPLPSDDGAAVRAVNKRFEGLLTVRTKAIKGKGAWYWAHLEPILVPHPDTGLPKSVKLKCSLCDSLFSASNPSRTASEHLKRGTCSNFSSGLRPGSVPSPLPISSITPGSNRKRGSPQMGATSPSSYQNHSLAMVESSRFDIGYTQMQNSNNNSNSNNNNNNNNIMHLQHHGQSQQHLMLSGGKDDLCALAMFEDSVKKLKSPKTSPGPALSKDQVNSALDLLFDWFYETCGSVSLSSLEHRKFQAFLSQVGLPGNLRREVSGGRLDARFGEAKAESEARIRDAMFFQLASDGWKSGGLFSFNSCCGGGESLVKFVVNLPNGSSVFQKAVFTGGVENSKYAEEVLWETVTAVTGSVVHRCVGIVADKFKAKALRNLEAQHHWMVNTSCQLQGLVSLIKDFNRELPLFRAVIENCLKVANFMNSESQVRSLFLKCRVQEMDCGGLIRVPSPKCDPLKNFQLVFPMLEDILSCARVIQMVVMEDGFKVMCMEDTLAREVAGMVQNEGFWNDLEAVYSVVKLVRGMVHDVEAERPLIGRCLPLWEELRSKVKEWCGKFNIVEGPVEKIVEKRFRKNYHPAWAAAFILDPLYLIKDASGKYLPPYKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSDGLDPLYAQAVQMKQRDPITGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKFSANKQSRVALERTQKMIYIAAHAKLERRDFSSEEEKDAELFAMSGSEDGMLAEVYADAPLV 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00557 810 MobiDBLite consensus disorder prediction 185 205 - -
Phco5g00557 810 MobiDBLite consensus disorder prediction 1 20 - -
Phco5g00557 810 SUPERFAMILY Ribonuclease H-like 394 775 IPR012337 -
Phco5g00557 810 MobiDBLite consensus disorder prediction 111 168 - -
Phco5g00557 810 PANTHER OSJNBA0013A04.12 PROTEIN 54 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00557 Phco-Chr5 5212255 5214687 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00557 5 5212255 5214687 Phco6g02015 6 39873773 39875923 ECH
Phco5g00557 5 5212255 5214687 Phco5g00557 5 5212255 5214687 ECH
Phco5g00557 5 5212255 5214687 Phco6g02015 6 39873773 39875923 PCT