Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00450 ATGGCGAGGAAGATGCATTGTGCCCCTCAAGAGATAGGTAATGATAGTCCAAAAGTTTCAGAAGCAAGAAAGGATTCCTTATCAACAATATATCAACAGCAAAATAAATTCACATCTTTAGAGGGTTGTCAAGAATCTTCTCTTTCCAGGATTAACTCTGATAGTAGGTGTGCCATTATTTCGTTCAACTTTGAGCCTGATGGAACCTGGAGAATTGTTGCCCTACCAGGGCAGTGTCTCAATTACATTAACTTAGCTTCTGGTGTAAATATGGATGGTGTGCAACTGCTTGTCTCTCCACCGCTTAATAGGTTGAAGATTGATCAATGTAAGGGCCGTAGAATGCCTCTTCCTTCCTATGCTTATTCTGCTAAATCATGTACAAAAAAAGGCTTTACTAGTTCAAATGTGCTTCGTCGATGTCAAAACAAGATTGCTAACAGAGCTTCTAAACTGAATGAATTACCTGACAATTCGAGTTCTCAAAGCTCATTAGTCTGCAGCCCTGGTTTGTTCCCTGATAGTTCTGCAGAAGTTAATTCATCCAATAAGTATGCAAGTAATTCCAAGGAAGATGATAAGTCTTTGAAGAAAAACTCAAGAAAACGTGCAAGAAAGAAATTTAGACGGAGCAAGAAGAAGTCAAGTGACAGTGGCTCTACTGAACTCGAAGTTGTTACTGAGGAATATGTCTGTGCAAGTTTGACTTCTGAAACCTGCAGCAGCAATGTTGGGGATAAGGAGGGCATGGCAGAATTTTCAACTTCTGATGATAGATTAATAAAATCTGATTGTGACAAAAATGAGATGAATGACAACATCAAAGTTATGGAAGCACCTAACAATAGTAACTCTTATCTTGATCAGGCAGCAATGTCAAAAGATTCTTCACCTATTATTCCAAGTTCTGCAGGAGAATGTGCCGTATTTGAATCCAAGAATCAGCTCAAAGGTAGGGGCCCTGAGGCAGTCATTGATAGAGAAATAAAGAACATCCAACATGCTCAGCCATGTAGTTTTAATGATATACAAGACTCTTTAGTGATAGATTCAGTTTCAGTTGGTTCCAGAAGTGATGGAAGTATAAATGCAGATGATATAGGAAAACAGTCCAACAAGGCAAATTGCACAACCATTTCAGATTCACGAGACGGATATTTTCTTTGTCAAAACTTGACAAATGATATTCACAATAACTGTGAACATATGGAGGGGATTATGCACAGTGGTCAAAATTGCATCAGTAATGATAAGAGAGTTAAGCAGAAGAGAACAATGTCAAACAATTCAGGTTTAAACAAATTTGGGGGCGTTGGAATTTTGCACAGTCGAAAAGGGAAGGAAAACAGTCATTCTGTGTGGCAAAAGGTTCAGAAAAATAGTTCTGATGGATGTGGCAGTGATTTGAAGAAAGTAAACACTACTTTGTCACAACTTGCTTCCATTGTGGAAAAGGATCCCTCGGTTATCAAAGAATGTAATTCTGTTGGTGTACATGGTGTATCAAAAACTGAGGATAAGAAACAAATGAAAAATAAAATTGGTAAGAAATCAAAAGGTAAAATGGACTCAGTGTCAAAAAAGGGACAGAGCAATTATTCTAGGAAGAGTTTGCATTTTAACAGGTCTTTGTCAAATGATCATGGGAAGGTTGGTGTTCAACAGAATGATATGTTGCGTATCTCATCTCAGGAATTTGATCAGCATGGATTGATCAATGACTCTGGACTTAATTCTGATGTTCACTGCTTGCTAGACGGGGTCCAGACCTTTGGAGTTGAACAGGTAACATCTGAAAAAATTCACAGTGCAGAATTTCATCTGGAGGAGTCAGATACACAAAATAGTGCCTGCCATACTGTTGCAAACACAAAAAAGGAAAGTATAGATAGTCAGGATAGCTCATTAGTAATGCCAAGTGAGAATGTCAATCAATCAAATATGTCGGTGGAGCTGTCTCCAGCATCTTGCGATCTTGAAGGTGATGAGGTTGGTCAAACAGAGAAAGAAGTTTTTTCTGCAGATTGCAATGCACAAAACCAGTGCTCTGGAACTACCTTATGGAAATGGATACCAGTTGGGAAAAAAGATACAGGGTTGGAGAAATCTGAATCTAATATTTTACCACCAGATTATTTGGATGAATCCTCTAGTAACAATTTTAACTATGAAAGTAGTGTTGAACCAGAAGTGGCCTCTTCTGAAAGTAAGGATTCTTCACTAAATGCAAGCAGAACATCAAATTGCCAGATTTACAACAATGTGTGCTGTCTAGGTGAGGGTGAGAACCATAAATTGGGTGGGCAGGTTGCATTTACATTGACACAGCATAGGGACAAGCAAGAAGTTTCTAATCACATGTTTTATGAAAGCAAAAATCAAGAAATGTTAGAAAAGGATTCTTACAGAATATCTCAAGCTGTGAATGATGCCTGTAGGGCACAACTAGCTTGTGAAGCGGTGCACATGGCTACAGGTGGTCCAGTTGCAGAGTTTGAAAGACTACTTCATTTTGGTAGTCCTGTGATTTGTAAATCACTTGATTCAATCAGTTGTTCGACCTGTTCACACAACCATCCTGGTGCTGTCTCACTCTGCAGACATGAGATCCCTAACCTATCTTTGGGATGCCTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGATTAGAGATAAGTGCTCAGGATCATGAAAATCCAAAGAGACAAGGAGGTGTTGGTGATTTTCCATTCCGGGCGTATTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCATGAAAATCAATGTTTAAATAGCGGTGAAAATCTTTCAAATTGTGAGGTTTCAGAGGCATGCGAAATGATTGATATTTCAGAAAACTCATCTACTGCCAGTCAACATTCAATATTTTCTGTTCTTTTTCCTCAGCCTCGCAATCAGGATGCAAGCATTGAAACACCAAAGGAGACAGCTTCTATCAGTAATAGATCTATTCCGTCTATCAACTCAATGTGCTCTGGTGATTTAGAACTTCTTTTTGAATATTTTGAATTTGAGCAACCTCAACAAAGACAGCCTCTGTATGAGAAGATACAAGAACTTGTTAGAGGAAATATACCAATCCAGTCTTCAACATATGGGGACCCAACAAAACTGGATTCAATAAACCTGCGAGATCTTCACCCTAGATCTTGGTTCTCAGTTGCATGGTATCCTATTTACCGCATACCAGATGGCAACTTTCGTGCATCTTTTTTGACTTACCATTCACTTGGACATTTGGTTCGTAGAAGAACAGGTTCAGATTTGTCAACATCAGGTTCTTGCATAGTATCCCCAGCCGTGGGTCTTCAAAGCTACAATGTCCAGGGAGAATGCTGGTTCAAGCTGAAGAACTCTGCACTAGCAGCAGCACAAATGGTGGGCTTAGACCCTTCTTTAGTTCTGAGAGAACGTTTGAAGACACTTGAGTTAACAGCATCTCTGATGGCAAGAGCTGTGGTGAACAAGGGGAAGCTAACATGTACAAACAGACATCCAGATTATGAGTTTTTCTTGTCTAGGCGACGGTATTGA 3564 0.3939 MARKMHCAPQEIGNDSPKVSEARKDSLSTIYQQQNKFTSLEGCQESSLSRINSDSRCAIISFNFEPDGTWRIVALPGQCLNYINLASGVNMDGVQLLVSPPLNRLKIDQCKGRRMPLPSYAYSAKSCTKKGFTSSNVLRRCQNKIANRASKLNELPDNSSSQSSLVCSPGLFPDSSAEVNSSNKYASNSKEDDKSLKKNSRKRARKKFRRSKKKSSDSGSTELEVVTEEYVCASLTSETCSSNVGDKEGMAEFSTSDDRLIKSDCDKNEMNDNIKVMEAPNNSNSYLDQAAMSKDSSPIIPSSAGECAVFESKNQLKGRGPEAVIDREIKNIQHAQPCSFNDIQDSLVIDSVSVGSRSDGSINADDIGKQSNKANCTTISDSRDGYFLCQNLTNDIHNNCEHMEGIMHSGQNCISNDKRVKQKRTMSNNSGLNKFGGVGILHSRKGKENSHSVWQKVQKNSSDGCGSDLKKVNTTLSQLASIVEKDPSVIKECNSVGVHGVSKTEDKKQMKNKIGKKSKGKMDSVSKKGQSNYSRKSLHFNRSLSNDHGKVGVQQNDMLRISSQEFDQHGLINDSGLNSDVHCLLDGVQTFGVEQVTSEKIHSAEFHLEESDTQNSACHTVANTKKESIDSQDSSLVMPSENVNQSNMSVELSPASCDLEGDEVGQTEKEVFSADCNAQNQCSGTTLWKWIPVGKKDTGLEKSESNILPPDYLDESSSNNFNYESSVEPEVASSESKDSSLNASRTSNCQIYNNVCCLGEGENHKLGGQVAFTLTQHRDKQEVSNHMFYESKNQEMLEKDSYRISQAVNDACRAQLACEAVHMATGGPVAEFERLLHFGSPVICKSLDSISCSTCSHNHPGAVSLCRHEIPNLSLGCLWQWYEKHGSYGLEISAQDHENPKRQGGVGDFPFRAYFVPSLSAVQLFKNHENQCLNSGENLSNCEVSEACEMIDISENSSTASQHSIFSVLFPQPRNQDASIETPKETASISNRSIPSINSMCSGDLELLFEYFEFEQPQQRQPLYEKIQELVRGNIPIQSSTYGDPTKLDSINLRDLHPRSWFSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRRTGSDLSTSGSCIVSPAVGLQSYNVQGECWFKLKNSALAAAQMVGLDPSLVLRERLKTLELTASLMARAVVNKGKLTCTNRHPDYEFFLSRRRY 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00450 1187 MobiDBLite consensus disorder prediction 177 220 - -
Phco5g00450 1187 MobiDBLite consensus disorder prediction 501 550 - -
Phco5g00450 1187 Pfam Protein of unknown function (DUF789) 830 1181 IPR008507 -
Phco5g00450 1187 MobiDBLite consensus disorder prediction 1 20 - -
Phco5g00450 1187 MobiDBLite consensus disorder prediction 501 524 - -
Phco5g00450 1187 MobiDBLite consensus disorder prediction 199 213 - -
Phco5g00450 1187 MobiDBLite consensus disorder prediction 700 742 - -
Phco5g00450 1187 MobiDBLite consensus disorder prediction 710 742 - -
Phco5g00450 1187 MobiDBLite consensus disorder prediction 525 540 - -
Phco5g00450 1187 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 12 1186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00450 Phco-Chr5 4135655 4142984 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00450 5 4135655 4142984 Phco5g00450 5 4135655 4142984 ECH