Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00333 ATGCGGCCGCCAGAATCCTTGCTATCGCGCATTCTCCACGAGTCTCTGATTTTTGCGGAAATAGACGACAAAAAGGCTTATAACAGAGTCGCTGTGCTGAAATCAATCGGAAGGTTCTTCGCAATGGCGTCTCGGAAGGCGATTGGATTTGTTGGCGTTGACGAGTTCAGCTTGGAGATGGCGCATTCCGCGATTCGCCATGGATACGATGTGCAAGCTTTCGAGATAAATAATCCCGTCATTGAAGAAATCGTGAAGCTTGGAGGAGTTAGATGTTCAAGCCCTTCGGAAGCTGGGAGAGATGTAACAGCTCTAGTTATCCTAATATCTCACACTGATCAAACTAATGACCTCATTTTTGGAGATGAGGGTGCTTTGAAAGGTCTAAAACCAGATACTGTTCTTATTCTGCGTTCGACCATATTAGCATCATTTCTCCATAAACTGGAGAGGGATCTAGCAGAAATTCATGAGATTGCTTATGTTGTTGATGCATATGTCTCTTATGGGAGATCTGATGCTTTGAATGGAAAAGTCATCATAGCATCATCTGGAAGACTAGATGCAATTGCACGAGCACAGCCTATTCTCTCTGCAATGTGTGAAAAGCTCTTCACTTTTGAGGGTGAAATTGGTGGTGGCAGCAAGGTTAAAATGGTTAATGTGATGCTCGAAGGCATTCATTTCATTAATGCAGTGGAGGCTCTCTCTCTTGGTGCCAAAATTGGAATTCATCCTTGGATAATCTATGATATAATTTCCAATGCTGCAGGAAATTCATGGGCGTTCAAGAATTATTTACCCCTTTTGTTAAAGGGAGAGGTTAATCATCAAATTCTGAACACTTTTGTTAAGGAGTTGGAAATCATTTTGAATATGTCCAAGTCACTTACTTTTCCACTTCCAATTTTGGCTGCTACTCATCTACAACTTATTCACGGGGTTTCGCTTGTTGATAGTGGAGATGATGTTGCAGTATTGATCAAGGTTTGGGAAAAGGTTTACGGGGTTAAAATTTCAGATGCTGCAAAGGCTGATGCGTATAACCCAGAGCAACTGGCATCTGAATTTACTACTGATTCTAAGAGTGTGAGAAGGGTTGGTTTTATCGGCCTTGGAGCTATGGGATTTGGCATGGCAACTCACTTACTGAGTTCAGAATTTTGTGTTGTTGGTTATGATGTGTATGAACCAACTCTAAGACGATTTACAAATGCTGGTGGCCTGATTGGAAATTCTCCAGCTGAAGTGAGCAAAGATGTTGATGTTCTCATAATTATGGTCACGAATGAATCACAAGCAGAAAATGTTTTATATGGAGAAAATGGTGCAGTTTCAGCTCTTCCAACTGGAGCATCTATCATTCTCTCTTCCACGGTTTCCCCTGCATACGTGAGTCAGCTGGAGCATAGATTGCATGATGAAGGTAAGAATTTGAAGTTGGTGGATGCCCCGGTTTCTGGTGGTGTTACGAGGGCCTCATTGGGAACTCTTACGATAATGGCGTCAGGAACTGATGATGCCCTTAAGAGTGCTGGTCGGGTCTTAGCAGCCTTGAGTGAGAAGCTTTATATTATCAAAGGTGGTTGTGGTTCTGGAAGTGGTATAAAGATGATTAACCAATTGCTTGCTGGAGTTCACATTGCCTCAGCTGCTGAGGCAATAGCATTTGCAGCTCGGTTGGGTTTGAATACAAGACTGTTGTTCGATTTTATTACAATTAGTGGGGGAACTTCCTGGATGTTTGAGAATCGTGGCCAACACATGATAGACAATGATTACACACCATGTTCAGCACTTGATATCTTTGTGAAGGACATGGGAATTGTTACTCGTGAATCATCTACATGGAAAGTTCCACTTCAGCTATCAACTATTGCTCACCAACTATATCTGGCAGGTTCTGCTGCTGGCTGGGGGCGGATTGATGATGCTGGTGTTGTCAAGGTTTACGAGATGCTAACTGGTGTAAGAGTTGAAGGAAAACTCCAGGCTCAAAGGAAAGATGCCATGTTACATTCTCTTCCACCAGAGTGGCCCCAAGATCATGTTCTTGATATACAAACACTAAAAGAAAGCAATTCAAAGATTTTAGTTGTATTAGATGATGATCCGACAGGAACACAAACTGTTCATGATATTGAGGTATTAACAGAATGGACCATTGAGTCACTGGTTGAGCAGTTTAGAAAAAGTCCAAAATGCTTTTTCATTTTGACAAACTCCAGGTCACTGAGTTCTGACAAGGCCAGTGCACTGATAAAAGAGATTTGCAGAAATCTGGACATTGCTGCAAAATCAGTTGACAACATTGACTATTCCGTAGTTTTGAGGGGAGATTCAACTTTACGAGGTCATTTTCCAGAGGAAGCAGATGCGGTTGTTTCAGTATTGGGTGAAATGGATGCATGGATAATTTGTCCCTTTTTCCTTCAAGGGGGTCGTTACACTATTGCAGACACACACTATGTTGATGATTCTGATACGCTTGTTCCTGCAGGGGACACAGAGTTTGCTAAAGATGCTTCCTTTGGCTACAAATCTTCAAACCTGCGTGATTGGGTAGAGGAGAAGACAAATGGCCGAATACTTGCTAGTAGTGTTGCATCTGTTTCTATCCAACTTTTGAGGAAAGGAGGTCCAAATGCAGTTTCTAAGCATCTATGCAGTTTGCAGAAGGGGACAATATGTGTAGTTAATGCAGCTAGTGAACGAGACATGACTGTTTTTGCTCTTGGAATGATCAAGGCAGAATTGACAGGAAAACGTTTCTTGTGTCGCACTGCTGCTAGTTTTGTCTCTGCACTTATGGGAATCATCTCTAAGCCACCAATATTGCCAAGTGATGTAGGAATAGCTAGAGAAAAGAATGGTGGTCTGATAGTTGTGGGATCCTATGTTCCAAAAACAACAAAGCAGGTTGAAGAACTCAAACTACAGTGTGGTCAGTTCTTAAAAAGCATTGAGGTATCAGTTGAAAAACTTGCAATGAGCCCTATGGAAGAGAGGGAGGAAGAAATCAGTAGAACAGCTGAATTAGCAGACATATATCTTAAAGCTCATAAAGACACTTTAATAATGACCAGCCGAAATCTCATAACTGGAAGAACTGCAGCTGAGAGTTTGGACATTAACTTTAAAGTGAGTTCTGCTTTGGTGGAAATAGTGAAAAGAGTAACTACAAAACCTCGCTATATAATTGCAAAGGGTGGTATTACGTCGTCAGACCTCGCTACAAAAGCCCTTGGTGCAAGATGTGCGAAGATAGTTGGGCAAGCACTTGCTGGTATTCCCTTGTGGCAATTAGGCCCTGAAAGTAGACATCCTGGAATTCCTTACATTGTCTTCCCTGGTAATGTTGGTAACAGCACAGCATTGGCAGAAGTTGTGAAGTCCTGGACTTATCCAATCAGATTTACATCAACGAAAGAAATTCTTAATAATGCGGAAAAGGGTGGTTATGCTGTTGGAGCATTTAATGTCTACAATTTGGAAGGAGCTGAGGCTGTTGTTTCTGCTGCTGAGGAAGAACAAAGTCCTGCTATATTACAGATCCATCCAGGAGCCTTGAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCATTTCTGCTGCAAAGCAAGCCAGTGTTCCCATTACTGTTCACTTTGATCATGGAACTTTAAAGCAGGATCTTGTGGAAGCTCTTGACCTGGGATTCAGTTCCATAATGGTTGATGGTTCACATCTTTCTTTCAATGAAAATGCTGCATACACAAAATTTATAACATTACTGGCACACTCAAAAAATATGCTGGTTGAAGCTGAGCTAGGAAGGTTGTCAGGGACAGAAGATGATTTAACTGTAGAAGAGTTTGAAGCCAGACTAACAGATGTGAATATGGCATCAAAATTCATAGATGAGACTGGAATAGATGCTTTGGCAGTGTGTATTGGTAATGTGCATGGAAAGTACCCTGCAAGTGGTCCAAATCTCAGAGTTGACCTGCTTAAGGAGCTGCATGCTTTGAGCCTGAAGAAAGGAGTTTATCTAGTGCTTCATGGTGCGTCTGGTTTGAACAAAGAACTTGTTAAGGAGTGCATAAATCTTGGTGTTAGAAAGTTCAATGTGAACACCGAAGTAAGGAAAGCATACATGGACTCCCTGATTACCCCCAAGAACGATCTAGTTCATGTCATGGCTTCTGCAAAGGAAGCCATGAAGGCTGTGGTTGCAGAAAAGATGCATCTCTTTGGTTCAGCAGGAAAGGCATAA 4254 0.4196 MRPPESLLSRILHESLIFAEIDDKKAYNRVAVLKSIGRFFAMASRKAIGFVGVDEFSLEMAHSAIRHGYDVQAFEINNPVIEEIVKLGGVRCSSPSEAGRDVTALVILISHTDQTNDLIFGDEGALKGLKPDTVLILRSTILASFLHKLERDLAEIHEIAYVVDAYVSYGRSDALNGKVIIASSGRLDAIARAQPILSAMCEKLFTFEGEIGGGSKVKMVNVMLEGIHFINAVEALSLGAKIGIHPWIIYDIISNAAGNSWAFKNYLPLLLKGEVNHQILNTFVKELEIILNMSKSLTFPLPILAATHLQLIHGVSLVDSGDDVAVLIKVWEKVYGVKISDAAKADAYNPEQLASEFTTDSKSVRRVGFIGLGAMGFGMATHLLSSEFCVVGYDVYEPTLRRFTNAGGLIGNSPAEVSKDVDVLIIMVTNESQAENVLYGENGAVSALPTGASIILSSTVSPAYVSQLEHRLHDEGKNLKLVDAPVSGGVTRASLGTLTIMASGTDDALKSAGRVLAALSEKLYIIKGGCGSGSGIKMINQLLAGVHIASAAEAIAFAARLGLNTRLLFDFITISGGTSWMFENRGQHMIDNDYTPCSALDIFVKDMGIVTRESSTWKVPLQLSTIAHQLYLAGSAAGWGRIDDAGVVKVYEMLTGVRVEGKLQAQRKDAMLHSLPPEWPQDHVLDIQTLKESNSKILVVLDDDPTGTQTVHDIEVLTEWTIESLVEQFRKSPKCFFILTNSRSLSSDKASALIKEICRNLDIAAKSVDNIDYSVVLRGDSTLRGHFPEEADAVVSVLGEMDAWIICPFFLQGGRYTIADTHYVDDSDTLVPAGDTEFAKDASFGYKSSNLRDWVEEKTNGRILASSVASVSIQLLRKGGPNAVSKHLCSLQKGTICVVNAASERDMTVFALGMIKAELTGKRFLCRTAASFVSALMGIISKPPILPSDVGIAREKNGGLIVVGSYVPKTTKQVEELKLQCGQFLKSIEVSVEKLAMSPMEEREEEISRTAELADIYLKAHKDTLIMTSRNLITGRTAAESLDINFKVSSALVEIVKRVTTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWQLGPESRHPGIPYIVFPGNVGNSTALAEVVKSWTYPIRFTSTKEILNNAEKGGYAVGAFNVYNLEGAEAVVSAAEEEQSPAILQIHPGALKQGGIPLVACCISAAKQASVPITVHFDHGTLKQDLVEALDLGFSSIMVDGSHLSFNENAAYTKFITLLAHSKNMLVEAELGRLSGTEDDLTVEEFEARLTDVNMASKFIDETGIDALAVCIGNVHGKYPASGPNLRVDLLKELHALSLKKGVYLVLHGASGLNKELVKECINLGVRKFNVNTEVRKAYMDSLITPKNDLVHVMASAKEAMKAVVAEKMHLFGSAGKA 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00333 1417 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 365 523 IPR036291 -
Phco5g00333 1417 Pfam Nucleotide-binding C-terminal domain 960 1126 IPR031475 -
Phco5g00333 1417 Gene3D - 528 659 IPR013328 GO:0016491
Phco5g00333 1417 Gene3D - 209 340 IPR013328 GO:0016491
Phco5g00333 1417 NCBIfam ketose-bisphosphate aldolase 1139 1417 IPR000771 GO:0005975|GO:0008270|GO:0016832
Phco5g00333 1417 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 369 382 IPR002204 GO:0016491
Phco5g00333 1417 Pfam Sugar-binding N-terminal domain 698 936 IPR010737 -
Phco5g00333 1417 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 204 IPR036291 -
Phco5g00333 1417 PANTHER 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED 360 661 - -
Phco5g00333 1417 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 531 651 IPR029154 GO:0051287
Phco5g00333 1417 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 212 329 IPR029154 GO:0051287
Phco5g00333 1417 Pfam Fructose-bisphosphate aldolase class-II 1141 1416 IPR000771 GO:0005975|GO:0008270|GO:0016832
Phco5g00333 1417 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 530 652 IPR008927 -
Phco5g00333 1417 SUPERFAMILY Aldolase 1140 1417 - -
Phco5g00333 1417 CDD TBP_aldolase_IIB 1142 1415 IPR000771 GO:0005975|GO:0008270|GO:0016832
Phco5g00333 1417 SUPERFAMILY YgbK-like 698 1130 - -
Phco5g00333 1417 Gene3D - 950 1132 IPR042213 -
Phco5g00333 1417 Gene3D Aldolase class I 1133 1417 IPR013785 -
Phco5g00333 1417 Gene3D - 360 527 - -
Phco5g00333 1417 Gene3D - 41 208 - -
Phco5g00333 1417 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 366 524 IPR006115 GO:0050661
Phco5g00333 1417 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 48 205 IPR006115 GO:0050661
Phco5g00333 1417 Gene3D - 697 939 IPR037051 -
Phco5g00333 1417 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 338 IPR008927 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00333 5 2849312 2893808 Phco5g00333 5 2849312 2893808 ECH