LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco5g00301	ATGTCGCTACAAGGCAGCGACCGCCGTGATAGGTCAAGCGCCAGTGGAAACGGCACTGTGGCGGCCGCGAGCCTGAGGCTGCGGCTGAACCCAAACAAGGAGCACAAACCAGATGGCTACGAGGACCTGCAGTTGGATTTCAGCCCTAACATCTTCAGCTCCTTGGAGAGGTACCTCCCTCCGAGTATGCTCAACGTGGCTCGTGACGACAAGGCCAAATTCATGCGCGAGATTCTGCTCAAGTATCTACCCCTCGGGGAACGCAGCAGATCTCAAAAACATAGAGAATACAGACAGAAGATAATAGAAAATTATCAGCCACTTCATCGGGAGTTGTACTCTGTGAATCCTGCTACATTCTTTGTCCCCTCATTTCTGAGAGCAATTAATGATAATACTGATCAAAGCTTTAGAAGTATAATGTCTGAACCCTCTCCAGGCATTTTTGTATTTGACATATTTAAGACCAACTTTTGTGAGTTATTGCTATCTGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAACAAAGTTTCGGATCATGCGTCCCAATACAATGAATAAATATGGTGCTGTACTTGATGACTTTGGACTTGAAACGATGCTTGACAAGCTTATGGAAGGTTTTATTCGTCCTTTATCCAGAGTCTTATTTGCGGAAGTTGGTGGGGCAACCCTGGATTCTCATCATGGTTTTGTTGTAGAATATGGTAAAGATAGAGATGTTGACCTGGGTTTCCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGTTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGCATACGATGTGAAAAACATGTAAATACTGGAAGTCATTCAGAGGAGATCTTTGATTATTCTCATGTTCCTGGACGAGCTGTGCTTCATCGTGGTCGTCATCGCCATGGTGCTAGAGCTACAACATTCGGTAATCGGGTCAACCTACTTCTGTGGTGCAGAAGTTCTGTCTATAGGGAGATGAAACGGTATCAAAAAGATTTTTCCAGCTGGTGTGGCGAGTGCAGTCGTGAGAAAAAGGAAAGGCAACGCTCGACAATTGCTGCTACCAAATTGGAGTTGTTCAGGAGGGAAGGTGAATCCACTGCATAA	1125	0.4471	MSLQGSDRRDRSSASGNGTVAAASLRLRLNPNKEHKPDGYEDLQLDFSPNIFSSLERYLPPSMLNVARDDKAKFMREILLKYLPLGERSRSQKHREYRQKIIENYQPLHRELYSVNPATFFVPSFLRAINDNTDQSFRSIMSEPSPGIFVFDIFKTNFCELLLSEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPLSRVLFAEVGGATLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCEKHVNTGSHSEEIFDYSHVPGRAVLHRGRHRHGARATTFGNRVNLLLWCRSSVYREMKRYQKDFSSWCGECSREKKERQRSTIAATKLELFRREGESTA	374

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco5g00301	374	ProSiteProfiles	Fe(2+) 2-oxoglutarate dioxygenase domain profile.	227	326	IPR005123	-
	Phco5g00301	374	MobiDBLite	consensus disorder prediction	1	20	-	-
	Phco5g00301	374	MobiDBLite	consensus disorder prediction	1	41	-	-
	Phco5g00301	374	PANTHER	2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2	12	363	-	-
	Phco5g00301	374	SMART	p4hc	146	325	IPR006620	GO:0005506\|GO:0016705\|GO:0031418

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco5g00301	Phco-Chr5	2521237	2526407	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco5g00301	5	2521237	2526407	Phco5g00301	5	2521237	2526407	ECH