Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00288 ATGCTTCTTAGTCACATTGCCGCCGGATTCTGTTGGGTCGACCCGCCGCAACCCGACCGCAACCACAAAACCCGACTCAATTCCTCGCCTTTCCGTCGCCAGCTGGTGGCGCCGCCAAGTGCGGCGTTCCACGGCGTGCGAATGGAGAAGAAAGACCGCAAACGGCGACCGATATGCACTGCCGACGAGCTTCACCGCGTCGTGGTTTCGAACTCCGATTGGAAGCTCGCTCTGTGGCGCTACCTTCCTTCTCCCGAGGCACCGTTGAGGAACCACCCGCTTTTGTTGTTGTCAGGGGTTGCTACTAATGCAATTGGCTATGATCTCTCTCCTGAGTCTTCATTTGCTCGGTACATGTCGGCACAAGGTTTTGATACGTGGATTCTTGAGGTTCGCGGTGCTGGGTTGAGCACTATTGGAGATAGCTTGGAGGAAGATGACGAATGCCTAAATAATTTGTCTGAGATTGATTCTGCTATTTGTGATGAAATTGGTAAAAGCAGTGCTTCTCCAGCAAAAGTAATGGGATTTAAGGACCTTGGCTCTCCAGAGGTTATAACTAAATTTGAGGAAATGAGGCTAACAAGGAGGTTAATGGACATTTTTACAAGGATATCTGGAAAGCTTGCAGGCTTTCTGAATCCGGATTTATTGGAGGGAGGAAAGAACTCTGCAATTGTTGGTCAAATCAAGGATTTCAATAGGAGACTCCGAGCTATTATTGAAGGTCAACAGTTGTTCCCAGCACAGATTTTAGAATTGCAAGACCGGTTTTCTGCCACTCTAGAAGAGTTTCAGAAACAGCTTCAGTTGATTGTTAAGTATGATTGGGACTTTGACCATTATCTGGAAGAGGATGTACCTGCAGCGATGGAGTACATAAGAGCTCAATGTCAGCCAAGGGATGGAAAATTGCTGGCAATTGGTCACTCAATGGGGGGTATCTTGTTGTATGCAAAGCTTTCACGTTGTTGTTCTGAAGGAAAGGACTCTGGATTGGCATCTGTTGTTACTTTGGCATCATCACTTGACTATACCCCTTCAAGATCATCTCTCAAGTTGCTTTTACCCCTGGCAAATAACGAAAAACTAAGACCATGCCTTCTTTTGCAGGCAGAACCTGCTCAGGCTTTGAACATTCCTGCTATTCCAGTTGGGCCATTGTTGGCCACTGTTTATCCCCTTGCAAGCTACCCTCCGTATGTTTTATCTTGGCTGAACTCTCAGATTTCAGCTCAAGATATGATGGATGAAAAGCTATTTGAGAAGCTTGTTTTGAACAACTTCTGTACCATACCTGCCAAGATTCTCTTGCAGTTATCATCAGTTTTCCAAGAAGGTGGTTTACGTGACAGGAGTGGAACATTCTTTTACAAGGACCATCTCTGCAAAATTAATGTTCCTGTCTTGGCCATAGCGGGTGACCAAGACTTGATCTGCCCTCCTGAAGCTGTATATGAAACGGTGAAGCTTATTCCTGAAGAATTGGTTACATACAAAGTCTTTGGGGAGCTTGGTGGTCCACACTATGCCCACTATGACTTAGTGGGTGGTCGTCTGGCTGCAGATGAACTGTATCCATGTATAACAGAATTTCTCATTCAACATGACATGGTTTAG 1620 0.4586 MLLSHIAAGFCWVDPPQPDRNHKTRLNSSPFRRQLVAPPSAAFHGVRMEKKDRKRRPICTADELHRVVVSNSDWKLALWRYLPSPEAPLRNHPLLLLSGVATNAIGYDLSPESSFARYMSAQGFDTWILEVRGAGLSTIGDSLEEDDECLNNLSEIDSAICDEIGKSSASPAKVMGFKDLGSPEVITKFEEMRLTRRLMDIFTRISGKLAGFLNPDLLEGGKNSAIVGQIKDFNRRLRAIIEGQQLFPAQILELQDRFSATLEEFQKQLQLIVKYDWDFDHYLEEDVPAAMEYIRAQCQPRDGKLLAIGHSMGGILLYAKLSRCCSEGKDSGLASVVTLASSLDYTPSRSSLKLLLPLANNEKLRPCLLLQAEPAQALNIPAIPVGPLLATVYPLASYPPYVLSWLNSQISAQDMMDEKLFEKLVLNNFCTIPAKILLQLSSVFQEGGLRDRSGTFFYKDHLCKINVPVLAIAGDQDLICPPEAVYETVKLIPEELVTYKVFGELGGPHYAHYDLVGGRLAADELYPCITEFLIQHDMV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00288 539 PIRSF UCP031088_abhydr 20 539 IPR016969 -
Phco5g00288 539 FunFam Alpha/beta hydrolase family protein 270 535 - -
Phco5g00288 539 SUPERFAMILY alpha/beta-Hydrolases 66 534 IPR029058 -
Phco5g00288 539 Gene3D alpha/beta hydrolase 266 534 IPR029058 -
Phco5g00288 539 Gene3D alpha/beta hydrolase 61 165 IPR029058 -
Phco5g00288 539 PANTHER LYSOSOMAL ACID LIPASE-RELATED 68 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00288 Phco-Chr5 2375092 2379386 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00288 5 2375092 2379386 Phco5g00288 5 2375092 2379386 ECH