Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00246 ATGGCTGTAGGCAGCAAAACCAGAAATATGTTTGAAGGTTTGGTAAAAGAAGGGTCATTTAAATGGTTGCTTGGCAAGAAAAGTTACTTCGATGAAGAATTGGAAGAGATGGAAAATTCTCCTTCTGCTGGGAGGAATTTTATACGAGAGCTCTCTCCTGTTGCAAACCTAGTTGTTCGTAGATGCTCAAAAATCCTTAGAACCTCTTCAAGTGATCTTCAGGAGAGCTTCAATCAGGAGGCTTCTGATTCTGTAAAGCATCCATCACGATATGCGAGGAACTTATTGGAGTATTGCTGTTTCAAGGCACTTTTCCTGACTACACAAATGACTGGTCATCTCTTTGATAAAACATTCCGGCGTTTGACATTCGACATGATGTTGGCTTGGGAAGCCCCTGCTGCTGACAGCCAACCTTTAACTCATGTTGACGAGGATGTATCTGTTGGTTTAGAAGCTTTCTGTCGAATAGCCCCTTCAATTCCAATCATTGCCAATGTCATCATTAGTGAAAATCTTTTTGAGGCGCTGAGTTCATCAACTGGTGGTCGCCTTCAGTTCCCCATCTATGACAAGTACCTCAGTGGCTTAGAAAGAGCTATAAGAAAAATGAAGAGCAATTCAGAGTTGTCTCTCTTGGCTGCTGTAAGATCCTCTAGAGGAGAGAAGATTCTCGAGGTTGATGGAACAGTCACAACACAGCCAGTCCTTGAGCATGTAGGAATATCCACCTGGCCTGGAAGGTTAATCTTGACAGATCATGCACTTCATTTCGAAGCACTTCGTGTTGTATCCTATGACAAACCAAAAAGATATGACTTATCAGAAGATCTTAAACAAGTTGTTAAACCTGAGTTGACTGGACCATGGGGTACTCGACTTTTTGACAAGGCAGTGTTCTATAGTTCATCATCCCTATCAGAACCCGTTGTACTAGAGTTTCCAGAACTTAAAGGTCATGCACGTCGTGATTATTGGTTAGCTATCATTCAAGAGATTCTGTATGTTCACAGATTCATAAGAAAATATGGAATTAAAGGGGTTGCACGGGATGAAGTGCTTTGGAAGGCTGTTTTAGGAATTTTGCGATTACAAGCTATTCAGGATATTGGTTCCCCGATTCCTATACAGAATGATGCTCTTCTCATGTTTAATTTATGTGATCAGCTTCCAGGTGGAGACTTGATATTAGAAACCCTTGCAAATATGCAAAACATAAGAGAGTCAGATCGTGAGAATGATTTCAAGGGTGGTAGTGGAATGCATTCTATCTCAGCCTTGGACATGGTTTCTAACTTAGGATTTGTATTTGGAGCAAGTTCAAACAACTCAAATGAGAGCAGGATTGCTGTGGGTGAAATATCTGTTGGAGAAATGACTGAATTGGAAATAGCAGTTAAAGAATCTAAAAACAATCATAAAAAGGTTATATCTGCACAAGCGACAGTTGATGGTGTTAAAGTTGATGGCATTGACACGAATTTAGCTGTCATGAAGGAGTTACTTTTTCCTATAAATGAACTTGGGAAGTCTCTTCAATCTTTGGCTTATTGGGATGATCCGAGGAAGTCTTTAGGGTTTTGTTTGTTTTTCAGTTACATCATTTACAGGGATTGGCTTGGCTATGCGGCAGCACTGGTGCTTGTGTTATTTTCTGTTTTTATGATAATTACTAGATATTTTAGCCAAGGTAGGTCAGTTCCTGAAGTTAAAGTAATTGCTCCTCCCCCAATGAATACAATGGAACAGCTTTTGGCCGTTCAGAATGCTGTCTCTCAAGCTGAACAGCTCATCCAGGATGGCAATGTAATTTTGCTCAAGTTTCGCGGTCTGTTGCTGTCCATTTTTCCTCAGGCCACAGAGAAGTTGGCCTTTGGCCTTCTATCAACAGCTTTGATTTTGGCTTTCCTGCCTTCTAAATACATAGTTCTGCTACTATTCTTGGAGATATTCACAAGATATTCGCCTCCAAGGAAAACTAGCACAGAGAGATGGACGAGGAGATTAAAGGAATGGTGGTTCAGCGTACCAGCAGCTCCTGTCACAATTGAAAGAGAAAAGGAGGAAAAGAAGAAAAAATAG 2082 0.4073 MAVGSKTRNMFEGLVKEGSFKWLLGKKSYFDEELEEMENSPSAGRNFIRELSPVANLVVRRCSKILRTSSSDLQESFNQEASDSVKHPSRYARNLLEYCCFKALFLTTQMTGHLFDKTFRRLTFDMMLAWEAPAADSQPLTHVDEDVSVGLEAFCRIAPSIPIIANVIISENLFEALSSSTGGRLQFPIYDKYLSGLERAIRKMKSNSELSLLAAVRSSRGEKILEVDGTVTTQPVLEHVGISTWPGRLILTDHALHFEALRVVSYDKPKRYDLSEDLKQVVKPELTGPWGTRLFDKAVFYSSSSLSEPVVLEFPELKGHARRDYWLAIIQEILYVHRFIRKYGIKGVARDEVLWKAVLGILRLQAIQDIGSPIPIQNDALLMFNLCDQLPGGDLILETLANMQNIRESDRENDFKGGSGMHSISALDMVSNLGFVFGASSNNSNESRIAVGEISVGEMTELEIAVKESKNNHKKVISAQATVDGVKVDGIDTNLAVMKELLFPINELGKSLQSLAYWDDPRKSLGFCLFFSYIIYRDWLGYAAALVLVLFSVFMIITRYFSQGRSVPEVKVIAPPPMNTMEQLLAVQNAVSQAEQLIQDGNVILLKFRGLLLSIFPQATEKLAFGLLSTALILAFLPSKYIVLLLFLEIFTRYSPPRKTSTERWTRRLKEWWFSVPAAPVTIEREKEEKKKK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00246 693 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 3 691 - -
Phco5g00246 693 Pfam Plant protein of unknown function (DUF639) 460 686 IPR006927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00246 Phco-Chr5 2008289 2015051 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00246 5 2008289 2015051 Phco5g00246 5 2008289 2015051 ECH