Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00215 ATGATGAGTTCGGCGGCGAGGATGCCCAAGTTGGGCTCCTTCCGTCACAGCTTCGCCGAGAAGAAGGAGAGGTTGCTCTCCATGAAGGGCGGGGGTTACTCCCAAGTTGGGATCGCGCTGCCGGAGTCCGACGAGGAGGACAACTGGCCGCCCAGGCGATGCTGCTCATACCGCGCTGTCTCCGACAGGATCGTCGGAACGTGGAAGAGCGCGAAGCGCGTGGCGGCAAGAGCGTGGGAGATGGGGATGTCTGATCCCAGGAAGATCATATTCTCCGCCAAAATGGGACTCGCTCTCATTCTCCTTACGCTTCTGATTTTCCTTAAAAAGCCCTTTGAGGACATTAGTCGATACTCCGTTTGGGCCATTCTCACTGTCGTTGTGGTCTTCGAATTCAGCATAGGGGCAACTCTTAGCAAAGGGCTTAACAGAGGATTGGGGACTTTGTTAGCTGGAGGTCTAGCTTTGGGAATGGGAATTTTATCACAATTGGCTGGAAAATGGGAAGAGCTCATCATAACTGTTAGCATCTTCACTGTAGGATTTTGTGCCACATATGCAAAACAATACCCAACAATGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACCTACTGCTACATTATTGTATCAGGGTATCGAACAGGAGAATTTGTTCAAACAGCTATAAATAGATTTTTGCTCATTGCCCTTGGTGCTGCTGTGGCACTCGGGATAAATGTATGTATATATCCAATATGGGCTGGTGAGGATCTGCATAATCTTGTGGCAAAAAATTTCACGGGTGTTGCTGCGTCATTGGAAGGTGTTTTAAATAACTATCTTAATTGTGTTGAATACGAGAGAGTGCCTTCAAAAATTCTTACATACCAAGCTGCAGAGGATGTGGTTTACAAAGGCTACAGATCAGCTGTTGAATCTACAAGCACAGAGGATGCATTGATGGGTTTTGCTGTATGGGAGCCACCTCATGGTAAATACAAAATGCTTAGATATCCATGGCAAAATTATGTGAAAGTAAGTGGGGCTCTAAGGCATTGTGCATTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCACCACCAGAGAAGAGACAAGTCTTTAGAAGGGAGCTTCAGAAGGTAGGTTCTGAAGGGGCGAAAATTCTAAGGGAACTTGGAAACAAAGTAAAAAGAATGGAGAAACTAGGCGGGGAAGACATTCTTTATGAAGTACACGAGGCAGCAGAAGAATTGCAGCAGAAGATTGACAAAAAATCCTTCCTCCTCGTGAATTCAGAGAGCTGGGAAATCGGAAACAGGCCAAGAGGGGAGGGTGATCCTCAAGATCTCTTGAACGTGGATGAAGAAAGACACTTTTTGGAGTACAAGTCTCTCAGTGAAGCTGTGCTTGATCTCAGAGCTGTCAAAGTTCCAAAAGGTTGGGGAGAACAAGCAGCTCCTGAGAAGATACCTGCAGTGCATGTAGGTGTTGGTGATGAAAACATGTTCAGGAAACAGATATCTTGGCCTGCTCATATTTCCTTCCAAGCAGATGCAGTGACAAAAGAAGAATCTAAAACGTATGAAAGTGCTAGTTCTTTGTCTCTAGCCACTTTTACATCCCTTCTGATTGAGTTTGTGGCAAGGCTCCAGAACCTTGTGGATTCTTTCGAAGAGTTAGGTGAGAGAGCAAAATTTAAGGACCCTCTTGAGCAAGCACCAGCAACAACTGGTGGGTTTTGGAACCGGTTGTGTAATGTTTTGACGGGCAAGGATTGA 1779 0.457 MMSSAARMPKLGSFRHSFAEKKERLLSMKGGGYSQVGIALPESDEEDNWPPRRCCSYRAVSDRIVGTWKSAKRVAARAWEMGMSDPRKIIFSAKMGLALILLTLLIFLKKPFEDISRYSVWAILTVVVVFEFSIGATLSKGLNRGLGTLLAGGLALGMGILSQLAGKWEELIITVSIFTVGFCATYAKQYPTMKAYEYGFRVFLITYCYIIVSGYRTGEFVQTAINRFLLIALGAAVALGINVCIYPIWAGEDLHNLVAKNFTGVAASLEGVLNNYLNCVEYERVPSKILTYQAAEDVVYKGYRSAVESTSTEDALMGFAVWEPPHGKYKMLRYPWQNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFRRELQKVGSEGAKILRELGNKVKRMEKLGGEDILYEVHEAAEELQQKIDKKSFLLVNSESWEIGNRPRGEGDPQDLLNVDEERHFLEYKSLSEAVLDLRAVKVPKGWGEQAAPEKIPAVHVGVGDENMFRKQISWPAHISFQADAVTKEESKTYESASSLSLATFTSLLIEFVARLQNLVDSFEELGERAKFKDPLEQAPATTGGFWNRLCNVLTGKD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00215 592 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 61 572 - -
Phco5g00215 592 Pfam Aluminium activated malate transporter 79 561 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00215 Phco-Chr5 1758504 1764080 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00215 5 1758504 1764080 Phco5g00215 5 1758504 1764080 ECH
Phco4g03582 4 55742393 55746290 Phco5g00215 5 1758504 1764080 PCT