LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco4g03748	ATGATAGAATTGGGGTGTCGATGTCACCCCGGCATTCCCTCCCTACTATCTAAGAAAACATGGAAGCAAACAATTCTGCTATCATTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACCGCACCTTTATATGTATTTGGGACAATGCGAGGGATAGATCTTGCAGCAGATGAGGAAGTCGTTTATGAACTCTTCTCCTTTATTTTCTGGACGCTCACAATAATTTCCCTGCTGAAGTATGCCTCTATAGTGTTGAAAGCTGATGATGAAGGAGAGGGTGGCATTGTTGCTTTGTACTCACTGCTGTGTAGAAATGCAAAAGTTGGTCTACTCCCATGTGACAGAAGTGCAAACCAGGTTATGCTTTACGAGGAGAAAAGTTCTTCTAAGATCAAAGCCGATTCAAGAGCACGAAGGGCCATTGAGAAGCACAAGATCTGTCACTATTTAATATTGTTCTTAGCCCTCTTCGGTTCCTGCATGACCATTGGGGACGCAGTGCTCACTCCAGCCCTTTCAGTGTACTCAGCTTCAACTGGAGTTCAGAGATCCTTGACAGACATATTGAAAAACATATTTGCCTCTTCACAACATACTCAGGACTCCGTGTCAAACGCTCTAAAAGCATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGCCTGTTCATGCTGCAACATTGCGGTACACGTAAAATTGGGATCATGTTTGGACCAATAATTACTGCTTGGCTGCTGTTTGTCGCTGCAGTGGGAACATATAACATTTTCAAGTGGGATGTAAAAATTATCTATAAAATATCCCCAATCTACATATACAAATTCATCACAAAAATTGACATCCCCAGATGGAGATTGTTAGGGAGCGTCATTTTATGTGTAGCAGGATCGGAGGCAATGTTTGCTGATCTAGGCCATTTCTCCAAGAAATCAATTAAGATTGCATTTATATGCTTGATCTATCCGCTTCTTCTTTTATGCTATGCTGGCCAGGCTGCATATATCTCCAAAAATTTAACTGCTCCTGATTTTAATCATCTAAGTCAATCTATGCCAGATCATTGCAAACACTTGTACATAGTATTATCCCTTCTCTCTTCAGCCGTGGGAAGCCAAGCTACCATAACCGCTTGTTTCTCCATCATTAACCAGTGCCTGGCATTGAATTGCTTTCCCAGAGTGAAAGTTATTCACACATCAAAAACTATAAACGGGCAGATTTACATCCCTGATGTCAACTGGTTATTGATGATTTTCAGCCTCACTGTCACAATTGGTTTCAGAGACATTGTCAAAATTGGCAATGCAACAGCTTTGGCTATTATATGTGGAATGCTTGTGACAACCAGTCTGATGTCACTGATCATTGCTTTGTATTGGGAGAAGGATTTGATGGTGTCTGCGTGCTTTCTTCTATGTTTTGGGTTCCTAGAGGCTGCATATCTTTCGGCATGTCTGCTACAGTTCCACAAGGGATCGTGGTATCTGGTTGTCCTACTGGCAGTTTCCATGACAGTCATGCTTTCATGGCATTATGGAACCATGAAGAAGTACAAGTTTGATTTGCAAAACAAAGTATCAACCGAGTGGCTAATAGATATCAGTCCAGGCCTTGGGATTTCCCGAGTACCCGGAATTGGCTTCATTTACACTGACATAGTAGCAGGAATCCCAGCTTTCTTTTCACATTTCATTACAAATCTTCCTGCATTCCATCAAGTGTTGATCTTGGTATCATTCAAGTCTATACCTGTGCCTTACGTCCCAGAAAGTGAGAGGTACCTGATAGGTAGGATCGGGCCAAAGGATTACAAAATATATCGCTGCATTGTGAGAAGTGGATATTGTGATCACATAAGGGACACGGGTGATTTTGAGGAGAAGATTATTCGTTCTATTGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCCATGGTTTGCCCAGATGAAAGAATGATCTTTGTTGGACATAGAACGGTTGATGGAAATGCTTTAGTCCCTCTGGATGATTTAGACTCATCAAGCATGGGGCAAAGCCAGGTGAACAATGAATCTCAGATAAGTCCGGTAGATGAGTCGTTGGAGAGTAGCAGTGGTTGTAAAAAGAGAAAAAAGGTTCGGTTCATGTTGCCTCATAATAGTCCTAAAATGCAGGTATCTGTCAGGAAGGAGCTCTTGGAGCTAATTGATGCCAGGGAGAGTGGCAGTGCCTATTTCTTGGGGCAGTCACATTTAGTGGTGCGTGATGGCTCAAACTTTCTCAAGAGATTCTTAATAATGGTCTATCGTTTCAGCGAAAAAAATTGTCGGGAACCTCCTGTGGCTCTTAAAATCCCTCATGCTGCTCTTGTAGAGGTTGGTGTGATATGTACTATATAG	2391	0.4195	MIELGCRCHPGIPSLLSKKTWKQTILLSFQIVGIVYGQLSTAPLYVFGTMRGIDLAADEEVVYELFSFIFWTLTIISLLKYASIVLKADDEGEGGIVALYSLLCRNAKVGLLPCDRSANQVMLYEEKSSSKIKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASTGVQRSLTDILKNIFASSQHTQDSVSNALKAYVPVPSACVILVGLFMLQHCGTRKIGIMFGPIITAWLLFVAAVGTYNIFKWDVKIIYKISPIYIYKFITKIDIPRWRLLGSVILCVAGSEAMFADLGHFSKKSIKIAFICLIYPLLLLCYAGQAAYISKNLTAPDFNHLSQSMPDHCKHLYIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTINGQIYIPDVNWLLMIFSLTVTIGFRDIVKIGNATALAIICGMLVTTSLMSLIIALYWEKDLMVSACFLLCFGFLEAAYLSACLLQFHKGSWYLVVLLAVSMTVMLSWHYGTMKKYKFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIPVPYVPESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGDFEEKIIRSIGEFISIEQNDIESMVCPDERMIFVGHRTVDGNALVPLDDLDSSSMGQSQVNNESQISPVDESLESSSGCKKRKKVRFMLPHNSPKMQVSVRKELLELIDARESGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNCREPPVALKIPHAALVEVGVICTI	796

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco4g03748	796	MobiDBLite	consensus disorder prediction	677	699	-	-
	Phco4g03748	796	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	18	793	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phco4g03748	796	Pfam	K+ potassium transporter	29	618	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phco4g03748	796	MobiDBLite	consensus disorder prediction	677	700	-	-
	Phco4g03748	796	NCBIfam	potassium uptake protein	27	796	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco4g03748	Phco-Chr4	56846280	56850819	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco4g03748	4	56846280	56850819	Phco4g03748	4	56846280	56850819	ECH