Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03746 ATGGGTCTCTTCTTTTCAAGGAATCTACCATTGCTATTTCTTTATTCCAAGAATGCTTCTGCCCATTTCGTTCCCGACCATCTCGACCACATGATCTGCCTCGTCTCCCGCACCGGCAGGCAGCTGCAGCGCTACCACCTTGGCCGCCGCCAAGTTGTCGGATGCATTCCGTACAGATACAAGAGAAAGGGAAGCCAAGATAAGGAATTGGAGGTTCTGGTGATTAGTGCGCAGAAGGGCAATGGAATGCAGTTCCCCAAGGGAGGTTGGGAGAGCGACGAATCCATGGAACAGGCTGCTGTAAGGGAGACCATAGAGGAAGCTGGAGTCGTTGGAAACGTGGAAAATAAATTGGGTAAATGGTTTTACAAAAGCAAAAGCCAAGACACCTTACATGAGGGATATATGTTCCCTTTGCTTGTGGAGAAACAATTAGAGAATTGGCCGGAGAAGAACTTTCGAAAACGAACATGGATGACCGTTGCTGAAGCAAAACAAGTGTGTCCACATCCTTGGATGAAGGAGGCTTTGGATGTGTTGGTGAGTAGACAACCCCAATTCTGGAGTTTGCAGAGAGACACAACAGAAGGAATAACAATCATCAAGAGATTGATGGTAGATACAGAAAGAAATTTCTAG 639 0.4664 MGLFFSRNLPLLFLYSKNASAHFVPDHLDHMICLVSRTGRQLQRYHLGRRQVVGCIPYRYKRKGSQDKELEVLVISAQKGNGMQFPKGGWESDESMEQAAVRETIEEAGVVGNVENKLGKWFYKSKSQDTLHEGYMFPLLVEKQLENWPEKNFRKRTWMTVAEAKQVCPHPWMKEALDVLVSRQPQFWSLQRDTTEGITIIKRLMVDTERNF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03746 212 CDD Nudix_Hydrolase_9 51 174 IPR047198 GO:0016462
Phco4g03746 212 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 34 183 - -
Phco4g03746 212 Pfam NUDIX domain 51 172 IPR000086 -
Phco4g03746 212 FunFam Nudix hydrolase 17, mitochondrial 35 183 - -
Phco4g03746 212 SUPERFAMILY Nudix 37 181 IPR015797 -
Phco4g03746 212 ProSiteProfiles Nudix hydrolase domain profile. 48 181 IPR000086 -
Phco4g03746 212 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 35 184 - -
Phco4g03746 212 ProSitePatterns Nudix box signature. 88 109 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03746 Phco-Chr4 56837706 56838754 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03746 4 56837706 56838754 Phco4g03746 4 56837706 56838754 ECH
Phco4g03746 4 56837706 56838754 Phco5g00353 5 3065235 3066839 PCT