Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03735 ATGAAGAGTGAAGAAGAAAGAGCCTGCCCCAGAGGCCTGAGATTCTTCCACCAGATGAGTCCTCCCTTGCAATATTATAATTGCAAGAATACCCTCTGCATCCGTATTGCCCATTTCAGTCCAAAAACTGGTGGGGATTGCAATCTGGCAAAAACCATGGCTGGCCCCAAGTGGTTGTTCCTCTCTCTCGCGCTCTCTCTCTCCCTCCTCACTCTCTCTCTCTCCGTCGCCGCACGCCAATTCGTGCTCGTCCTTTCTCAGGAAGACTTCAAGGACGACCCTAGCACTGAACTCGATTCCTCCGCCGAGTGGGACGAGCTCGGCGATGGAGACGCCCACAAATCCGAGGAGGACCTCGACCCTGGCTCATGGCGCCCCATCTTCGAGCCCCCCGCCGGAGATCCCCAGCCTCTATCGGAGTCCGACGCTGCATACTACTCCGCCGTCGACAAACTCATGTCCGGTCTCCCCGCCCTCATTGAGGATGGCGCCTCAGAGATTGCCGCCGAGGCCGAGACCGGCCACCCCGCCGCCCAATCGGTTCTAGGGTTTTTGTGGGAAATGGGGCTTCTGAGAGAGCGAAGCAAGGGGAAGGCTTTCTTATACCACCACTTCGCCGCCGAGGGTGGCAACATGCAGTCCAAGATGGCTTTGGCTTATAAGTACACGCGCCAAGACATGTTTGACAAAGCTGTTAATCTGTATGCTGAATTAGCTGAAGTGGCTGTGAATAATTTTCTGATTTCGAAAGATTCCCCTGTGATTGAACCGGTTAGGCTCCACAATGGGGCTGAAGAGAACAAGGAGGCTCTGAGAAAATCAAAGGGGGAAGAGGACGAGGACTTTCAGATACTCGAGTATCAAGCCCAGAAGGGGAATGCTGCCGCCATGTACAAAGTTGGCCTCTTTTACTACTTTGGCCTCAGGGGATTGAGGCGTGATCACTCCAAGGCGCTTTCATGGTTTTCGAAGGCTGTGGAGAAGGGAGAACCACGATCAATGGAGCTTCTTGGAGAGATCTATGCCAGGGGAGCAGGTGTTGAGAGAAATTACACCAAAGCGTTTGAGTGGCTCACGCTTGCTTCCAGGCACCAGCTGTATTCTGCTTATAATGGCATGGGATATTTGTATGTCAAAGGCTATGGAGTTGACCAGAAGAATTACACTAAAGCAAAGGAGTATTTTGAAAAGGCTGCAGAGAATGAGGAGGTTGGGGGGCACTATAACTTGGGTGTCATGTATCTCAAGGGAATCGGAGTCAAGAGGGATGTTAAGCTGGCTTGTAAGTTCTTCGTGGTGGCTGCTAACAATGGTCAACCGAAGGCGTTCTTCCAGTTGGCTAAGATTTTCCACAATGGTGTTGGGTTCAAGAAGAATATTCAATTGGCTACTGCACTGTACAAACTAGTTGCTGAGCGGGGCCCATGGAGTTCTTTGTCCAGATGGGCTCTAGAGTCATACTTAAAAGGTGATCTTGGCAAGGCATTTATGTTGTATTCAAGAATGGCTGAGATGGGGTATGAGGTGGCGCAAAGTAATGCTGCTTGGATTCTTGACAAATATGGGGAACGTAGCATGTGCATGGGTGAATCTGGAATTTGCACTGATGCAGAAAGGCATCAGAGGGCACATTCTCTGTGGTGGCAAGCTTCTGAGCAGGGTAATGAACATGCTGCTTTACTCATTGGAGATGCATATTACTATGGTCGGGGTACGGCCAGGGATTACGAGCGAGCCGCTGAAGCTTACATGCATGCCAAATCACAATCTAATGCACAAGCCATGTTCAATCTTGGATACATGCATGAGCATGGCCAAGGACTTCCGTTTGACCTTCATCTAGCCAAACGTTACTATGATGAAGCTCTAGATCATGATCGTGCAGCAAAGTTGCCAGTTACGCTGGCTCTTTCAAGCTTGTGGATTCGTAAGAACTATGATGACAGTTTCATGGTCCACGTGATTGATTCATTGCCAGAACTGTATCCTAAATTAGAAGCTTGGGTGGAGAATGTGCTCATGGAGGAGGGAAATGCTACCATTCTGACCCTTTTTGCATGCCTCATAACTGTGCTATATCTCCGCGAGAGGCAACGAAGGCAAGCTGGTGTTGCAGCTGGAGAGGTGGCTCAGCCAAATCAACCCAACGAGCTTGGTGTACCTGCAGCACTCTAG 2175 0.5016 MKSEEERACPRGLRFFHQMSPPLQYYNCKNTLCIRIAHFSPKTGGDCNLAKTMAGPKWLFLSLALSLSLLTLSLSVAARQFVLVLSQEDFKDDPSTELDSSAEWDELGDGDAHKSEEDLDPGSWRPIFEPPAGDPQPLSESDAAYYSAVDKLMSGLPALIEDGASEIAAEAETGHPAAQSVLGFLWEMGLLRERSKGKAFLYHHFAAEGGNMQSKMALAYKYTRQDMFDKAVNLYAELAEVAVNNFLISKDSPVIEPVRLHNGAEENKEALRKSKGEEDEDFQILEYQAQKGNAAAMYKVGLFYYFGLRGLRRDHSKALSWFSKAVEKGEPRSMELLGEIYARGAGVERNYTKAFEWLTLASRHQLYSAYNGMGYLYVKGYGVDQKNYTKAKEYFEKAAENEEVGGHYNLGVMYLKGIGVKRDVKLACKFFVVAANNGQPKAFFQLAKIFHNGVGFKKNIQLATALYKLVAERGPWSSLSRWALESYLKGDLGKAFMLYSRMAEMGYEVAQSNAAWILDKYGERSMCMGESGICTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTARDYERAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDEALDHDRAAKLPVTLALSSLWIRKNYDDSFMVHVIDSLPELYPKLEAWVENVLMEEGNATILTLFACLITVLYLRERQRRQAGVAAGEVAQPNQPNELGVPAAL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03735 724 Gene3D Tetratricopeptide repeat domain 255 368 IPR011990 GO:0005515
Phco4g03735 724 MobiDBLite consensus disorder prediction 106 123 - -
Phco4g03735 724 FunFam ERAD-associated E3 ubiquitin-protein ligase component HRD3A 259 370 - -
Phco4g03735 724 SUPERFAMILY HCP-like 171 242 - -
Phco4g03735 724 Gene3D Tetratricopeptide repeat domain 369 483 IPR011990 GO:0005515
Phco4g03735 724 Gene3D Tetratricopeptide repeat domain 484 640 IPR011990 GO:0005515
Phco4g03735 724 Gene3D Tetratricopeptide repeat domain 163 250 IPR011990 GO:0005515
Phco4g03735 724 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 63 707 IPR044623 GO:0030433
Phco4g03735 724 SUPERFAMILY HCP-like 385 515 - -
Phco4g03735 724 MobiDBLite consensus disorder prediction 91 140 - -
Phco4g03735 724 Pfam Sel1 repeat 294 329 IPR006597 -
Phco4g03735 724 Pfam Sel1 repeat 558 580 IPR006597 -
Phco4g03735 724 Pfam Sel1 repeat 592 625 IPR006597 -
Phco4g03735 724 Pfam Sel1 repeat 332 364 IPR006597 -
Phco4g03735 724 Pfam Sel1 repeat 489 507 IPR006597 -
Phco4g03735 724 Pfam Sel1 repeat 407 438 IPR006597 -
Phco4g03735 724 Pfam Sel1 repeat 176 211 IPR006597 -
Phco4g03735 724 Pfam Sel1 repeat 368 401 IPR006597 -
Phco4g03735 724 Pfam Sel1 repeat 444 474 IPR006597 -
Phco4g03735 724 SUPERFAMILY HCP-like 275 400 - -
Phco4g03735 724 SUPERFAMILY HCP-like 487 626 - -
Phco4g03735 724 SMART sel1 592 627 IPR006597 -
Phco4g03735 724 SMART sel1 331 366 IPR006597 -
Phco4g03735 724 SMART sel1 176 211 IPR006597 -
Phco4g03735 724 SMART sel1 440 475 IPR006597 -
Phco4g03735 724 SMART sel1 367 403 IPR006597 -
Phco4g03735 724 SMART sel1 404 439 IPR006597 -
Phco4g03735 724 SMART sel1 556 591 IPR006597 -
Phco4g03735 724 SMART sel1 294 330 IPR006597 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03735 4 56782324 56787157 Phco4g03735 4 56782324 56787157 ECH