Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03722 ATGGCCTCAATGCGCATCACTCTCACCGCACTCTTCTTTCTACTCTCCACCCTCTCACTGCTCAAGCTTTCAGCAGCTGCGTCATTCGTATTCTACAACAAGTGTCCGCACCCAGTGTGGCCCGGGATCCAGCCCAGCGCCGGAAAGCCCATTCTCGCCCGCGGAGGCTTCAAGCTCGCCCCCAACCGGGCCTACTCCCTCCAACTCCCCGCCCTCTGGTCCGGCCGCTTCTGGGGCCGCCACGGCTGCGCCTTCGACGCCTCCGGACGCGGGCGCTGCGCCACGGGCGACTGCGGCGGGTCTCTCTACTGCAATGGCGTCGGCGGCACCCCGCCGGCCACCCTGGCGGAGTTCACCCTGGGCAACGAGCAGGACTTCTACGACGTGAGCCTGGTGGACGGTTACAACCTGCCCATCTCCATCACTCCCTTCAAGGGATCCGGAAAATGCAGCTACGCGGGGTGCGTCAGCGACCTCAACACCATGTGCCCCGTGGGCCTGCAGGTGCGTTCACGCGATAACAAGCGCGTGGTGGCCTGCAAGAGTGCTTGCTCCGCTTTCAACTCCCCCAAATACTGCTGCACGGGCTCCTACGGAAGCCCGCAGGCCTGCAAGCCCACGGTGTATTCGAAGATCTTCAAGAGCGCATGCCCCAAGGCCTACTCCTACGCCTATGACGACCCCACCAGCATCGCCACTTGCACCAAAGCTAACTATTTAATCACTTTCTGCCCTCATCGCCACTGA 747 0.6265 MASMRITLTALFFLLSTLSLLKLSAAASFVFYNKCPHPVWPGIQPSAGKPILARGGFKLAPNRAYSLQLPALWSGRFWGRHGCAFDASGRGRCATGDCGGSLYCNGVGGTPPATLAEFTLGNEQDFYDVSLVDGYNLPISITPFKGSGKCSYAGCVSDLNTMCPVGLQVRSRDNKRVVACKSACSAFNSPKYCCTGSYGSPQACKPTVYSKIFKSACPKAYSYAYDDPTSIATCTKANYLITFCPHRH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03722 248 PANTHER OS03G0233200 PROTEIN 14 245 IPR001938 -
Phco4g03722 248 SMART tha2 29 245 IPR001938 -
Phco4g03722 248 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Phco4g03722 248 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Phco4g03722 248 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Phco4g03722 248 PRINTS Pathogenesis-related protein signature 235 244 IPR001938 -
Phco4g03722 248 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Phco4g03722 248 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Phco4g03722 248 CDD TLP-PA 28 244 - -
Phco4g03722 248 SUPERFAMILY Osmotin, thaumatin-like protein 28 246 IPR037176 -
Phco4g03722 248 ProSiteProfiles Thaumatin family profile. 26 247 IPR001938 -
Phco4g03722 248 PIRSF PR5 1 248 IPR001938 -
Phco4g03722 248 Gene3D Thaumatin 27 245 IPR037176 -
Phco4g03722 248 FunFam Thaumatin-like protein 1a 27 245 - -
Phco4g03722 248 Pfam Thaumatin family 33 245 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03722 Phco-Chr4 56724882 56725628 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03722 4 56724882 56725628 Phco4g03722 4 56724882 56725628 ECH