Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03698 ATGGATATCGAGGAGGACATCCGTTCGTTACAGCTTGAGTCAGCAGATGACAATACTGGGGTGGTAAATCCAGATGATGGAAAGCCAGAAGAAGTTGAGAAGTCTGATAAGATGGATGAAGATCCTAAGCAGGAGGTTCAGGCACAGGCTGCTGAGGCTGAGCCAAAAGTGAAAGATAAGGAGATTCCTCCCGTTCAAGAAGAAGAAGAAGAGGAGCCAGAGACAACAAAAAGGCACTTGAATGTGGTGTTCATTGGCCATGTTGATGCTGGTAAGTCTACAACTGGAGGCCAGATACTTTTCCTCAGTGGTCAAGTTGACGAACGGACTATCCAAAAATACGAGAAAGAGGCCAAGGACAAAAGTCGAGAAAGTTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAGAGGATAAAGGGAAAGACGGTTGAAGTTGGAAGAGCACATTTTGAAACTGAGACAACAAGGTTTACTATTTTGGATGCGCCTGGCCACAAAAGCTATGTTCCTAACATGATTAGTGGTGCATCTCAAGCTGATATTGGAGTGTTGGTTATTTCTGCACGGAAGGGAGAGTTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAGCATGTCCAGCTTGCAAAAACGCTGGGTGTGTCTAAGTTGCTCGTTGTTGTTAATAAAATGGACGAACCTACAGTGCAGTGGTCAAAAGAAAGGTATGATGAAATTGAGTCAAAGATGGTTCCATTTCTAAAGCAATCTGGATACAATGTAAAGAAAGATGTCTTGTTTTTGCCAATATCTGGCCTAGTGGGTGCAAACATGAAAACAAGGGTGGACAAAAGTGTCTGCCCATGGTGGAACGGGCCTTGCTTGTTCGAGGCCCTTGATGCTATTGAAGTTCCTCTACGGGATCCCAAAGGTCCTTTCAGGATGCCCATTATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGCAAAGTTGAATCTGGTTCTGTTCGTGAGGGAGATTCCATGTTGGTCATGCCAAATAAGGATCACGTAAAAGTTGTTGCCATATTCATTGATGAGGATCGTGTTAAACGTGCTGGACCTGGTGAAAATTTACGGATTAGATTATCTGGTGTTGAAGAAGAAGACATGTTAGCTGGGTTTGTCCTGTCTAGTGTTGCTAATCCAATACCAGCAGTTACTGAGTTTGTTGCTCAGTTGGTGATCCTTGAATTGCTAGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTCTGCATATCCACTCTGTGTGTGCCGTGTTCAGGTTAATAACTCTATTTGCATTGAGAAGTTCTCTGATTTCCCACAACTTGGGAGGTTCACTCTTCGCACAGAAGGGAAAACTGTTGCCGTGGGAAAAGTCACTGGTCTGTGAGTTTGTAACAATTTTGACTGAGGACGGGAATTCCTGCACAGATGAATGGAGTGGCAGCTTTGAGGCATGGTTGACAGCATCAAGTTTACCATATATTCAGTTTGGTATTTATTTTGCTTTTACTTGGTAG 1539 0.4327 MDIEEDIRSLQLESADDNTGVVNPDDGKPEEVEKSDKMDEDPKQEVQAQAAEAEPKVKDKEIPPVQEEEEEEPETTKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVQWSKERYDEIESKMVPFLKQSGYNVKKDVLFLPISGLVGANMKTRVDKSVCPWWNGPCLFEALDAIEVPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSMLVMPNKDHVKVVAIFIDEDRVKRAGPGENLRIRLSGVEEEDMLAGFVLSSVANPIPAVTEFVAQLVILELLDNAIFTAGYKAVLHIHSVCAVFRLITLFALRSSLISHNLGGSLFAQKGKLLPWEKSLVCEFVTILTEDGNSCTDEWSGSFEAWLTASSLPYIQFGIYFAFTW 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03698 512 PANTHER TRANSLATION FACTOR 69 439 - -
Phco4g03698 512 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 57 301 - -
Phco4g03698 512 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 77 306 IPR000795 GO:0003924|GO:0005525
Phco4g03698 512 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 305 391 - -
Phco4g03698 512 Pfam Elongation factor Tu domain 2 321 387 IPR004161 GO:0005525
Phco4g03698 512 CDD eRF3_II 308 389 - -
Phco4g03698 512 CDD EF1_alpha 81 301 - -
Phco4g03698 512 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 133 148 IPR031157 -
Phco4g03698 512 Gene3D Translation factors 306 391 - -
Phco4g03698 512 Pfam Elongation factor Tu GTP binding domain 77 281 IPR000795 GO:0003924|GO:0005525
Phco4g03698 512 SUPERFAMILY Translation proteins 300 393 IPR009000 -
Phco4g03698 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 312 IPR027417 -
Phco4g03698 512 Gene3D - 56 301 IPR027417 -
Phco4g03698 512 MobiDBLite consensus disorder prediction 23 64 - -
Phco4g03698 512 PRINTS GTP-binding elongation factor signature 81 94 IPR000795 GO:0003924|GO:0005525
Phco4g03698 512 PRINTS GTP-binding elongation factor signature 220 229 IPR000795 GO:0003924|GO:0005525
Phco4g03698 512 PRINTS GTP-binding elongation factor signature 176 187 IPR000795 GO:0003924|GO:0005525
Phco4g03698 512 PRINTS GTP-binding elongation factor signature 160 170 IPR000795 GO:0003924|GO:0005525
Phco4g03698 512 MobiDBLite consensus disorder prediction 1 77 - -
Phco4g03698 512 Gene3D Translation factors 393 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03698 Phco-Chr4 56589226 56597575 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03698 4 56589226 56597575 Phco4g03698 4 56589226 56597575 ECH