Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03606 ATGGCGGGTTCTTCGATCATGGAGAACCTCTTCCAACACTCGCTGGAGGATCTCATTAAAGCCATGCGCCTCCAACTCATCGGCGAAACTACCTTCATCTCCAAGGCCACGGAGGAGATCCGCCGCGAGATCAAATCCACCGACCAGCAAACCAAATCCACCGCGCTCCAAAAGCTCTCTTACCTATCCTCCGTGCACGGCGTCGACATGTCCTGGGCGTCCTTCCAAGTTGTCGAGGTCATGTCCTCCTCCAAGTTCGCGCACAAGAGGATTGGTTACCACGCGGCTTCCCAATCTTTCAACGACGACACGCCGGTGCTCCTACTCATCACCAACCAGCTCCGCAAGGACCTCTCCTCCACCAACGAGTTCGAGGTAAGCCTCGCTCTCAATTTGTTGTCGCAAATCGCCACTCTCGACCTCGCTCGCGATTTGACGCCCGAGGTTTTCAAATTGCTCTCCACCACTAAGGTTTTCGTCAGGAAGAAGGCTATTGCCGTCGTTTTGAGGGTTTTCGATAAGTACCCGGACGCAGTTAGAGTTTGCTTCAAGCGCTTGGTTGAGAATCTCGAGAGCTCCGAACCTTTGGTTGTGACCGCAGTGATTGGAGTTTTCTGCGAGCTGGCTGCCAAGGATCCCAGGTCGTATCTTCCCTTGGCGCCGGAGTTTTATAGGATTTTGGTTGATTCTAAGAACAATTGGGTTTTGATTAAGGTGCTCAAGGTGTTTGCTAAGTTGGCTCCCTTGGAGCATAGATTAGGGAAAAGGATTGTTGAGCCGGTTTGTGATCACATCAGGAGGTCTGGGGCCAAGTCCTTGGTGTTTGAGTGTGTTAGGACTGTGCTCACTAGCTTGAGTGATTATGAGTCGGCTGTTAAACTCGCGGTTGAGAAGGTTAGGGAGTTGCTGGTTGATCAGGATCCCAATCTTAGGTATCTTGGGCTGCAGGCGCTTTCGGTTGCTGCACCCAAGCACTTGTGGGCAGTCTTGGAGAATAAGGAAGCGGTGGTAAAGTCGTTGAGTGATGATGATTTGAATATCAAGATTGAGTCTCTGCGATTGTTGATGGCCATGGTATCTGAGAGTCATGTTGCAGATATCTCCAGGGTGTTGCTTAATTATGCGTTGAAATCTGACCCTGGATTTGGCAACGAGATATTGGATTCCATTTTGAGGACATGTTGTAGAAATTTGTATGAGATTGTTGTTGACTTTGATTGGTATGTGTCTCTTCTTGGAGAAATGGCCACGATTCCTAATTGCCAAAAGGGGGAAGAGATTGAGACTCAGCTTGTTGACATTGGCATGAGAGTTAAGGATGCTAGAATGGAGCTCGTTCGGGTGGGGCGTGATCTGTTGATTGACCCTGCATTACTGGGTAATGTGCACTTGCATAGGGTATTGTGTGCTGCTGCTTGGGTTGCTGGAGAGTATGTTGAGGTTTCAAGCAATCCCTTTGAACTCATGGATGCACTCCTACAGCCTCGTACCAGTCTCTTGCCACCATCCATTAGAGCAGTTTATATTAATTCTGTTCTTAAAATTTTAATTTTTTGTCTGGACTGTTACCTTTTGCAAAGTGATGGTTCTGGATCTTTGTATTCTGTTAACTTAGAAGGGGGACAGTCAGAGTTGTTTAGTGCAAAAAATGACACCGAGGCTACTAAATTGGCAACTTGTGGAGGTTTAAACTATGAACAGGATGTTGGTTTTAACCCAAGGAATACAGCTGACTATTCTGAAGATCTTTCTGTTGAAAATGGTATAGATAGAGCTGCCACTCATGGTAAAACATTTACATCTACTCTATTGGCAAAGAAGAATTTCATGCACGAGTCTATTGTAAGCTTATTGAATAGAATTGAATTAATTTTTGGCCCGCTAATAACAAACCAGGATGTTGAAGTGCTGGAGAGATCACAAAACCTACTTTCGCTTGTTCAGTTGATTAAAGAAGAAATAATTGATAAATCTGTCCAGAGTGTGGACACCATAGAAAAGAAAGATACTCGAGTTTCAGCTATTATCAATTTCATGCGTGATGCTTTTACTACGGAACTTGGTCCAGTCTCAGTAAGTGCCCAGGGCAGAGTTGCTGTACCGGATGGACTAGTTCTTAAAGAAAATCTTGATGAATTACAAGCAATATGTGGTGATACTGAACTATCTTCATCAAGTTCGTTTGCCACAGGAGGCCCTCACCGTACCACTACATCCGATGCTTCTTCATCTAATCTTCTGAAAAATGAAGAGTCAGAGCCTTTGAATGAATCTACATCCTTGATTGAACACCGTAAGCGGCATGGGTTATATTATCTTCCTTCAGAGAAGAGTGAGATTGTTCCAGATGAGTATCCTCGGGCAAATGATCCAAAGTCAAACAGTAATATAAATGATGAAGCTGCCGAACTAGTCAAGCTGACAGAGCAATCACTTCTTCTGAAGAAAAGGACAATCCAAACAAAGCCCAGGCCGGTAGTAGTGAAATTGGATGATGGAGATCTGACACCAATTTCAGTCAAAAGGCCAGAGCCTAGGGACGATTCTCTTTCTGGAGCCATAAAAGATGTTCTTCTAGGAAGTGAAACTGGACCGAGTGTGTCTCGAAGTTATCCTTCTGATAAGTCATCAAGGAAGCAGAAAGAGAAAAAGAAACTAAGCACGAATGATCGATCTGAAATGAAGGAAAATGCAGTTGATTCTGAAAAGCCTGACCTTGAAATTCCAAATTCAAGTAGCAAAAACCATGGTCATAGTAAAGAGAGAAAACACAGAGGAAAAGAAAAGATTGTTGAGGGTGAAGAGCATGATCAGAAGGAAAAGAAAAAGAGTGGCCACCGACATGGTAGGAGAAAAACTCATCAAAGAGCGAAGTCACCCTTAAATGTGGCTTCCCAAACCCCAGTCATTCCAGATTTTCTTTTGTAG 2928 0.4457 MAGSSIMENLFQHSLEDLIKAMRLQLIGETTFISKATEEIRREIKSTDQQTKSTALQKLSYLSSVHGVDMSWASFQVVEVMSSSKFAHKRIGYHAASQSFNDDTPVLLLITNQLRKDLSSTNEFEVSLALNLLSQIATLDLARDLTPEVFKLLSTTKVFVRKKAIAVVLRVFDKYPDAVRVCFKRLVENLESSEPLVVTAVIGVFCELAAKDPRSYLPLAPEFYRILVDSKNNWVLIKVLKVFAKLAPLEHRLGKRIVEPVCDHIRRSGAKSLVFECVRTVLTSLSDYESAVKLAVEKVRELLVDQDPNLRYLGLQALSVAAPKHLWAVLENKEAVVKSLSDDDLNIKIESLRLLMAMVSESHVADISRVLLNYALKSDPGFGNEILDSILRTCCRNLYEIVVDFDWYVSLLGEMATIPNCQKGEEIETQLVDIGMRVKDARMELVRVGRDLLIDPALLGNVHLHRVLCAAAWVAGEYVEVSSNPFELMDALLQPRTSLLPPSIRAVYINSVLKILIFCLDCYLLQSDGSGSLYSVNLEGGQSELFSAKNDTEATKLATCGGLNYEQDVGFNPRNTADYSEDLSVENGIDRAATHGKTFTSTLLAKKNFMHESIVSLLNRIELIFGPLITNQDVEVLERSQNLLSLVQLIKEEIIDKSVQSVDTIEKKDTRVSAIINFMRDAFTTELGPVSVSAQGRVAVPDGLVLKENLDELQAICGDTELSSSSSFATGGPHRTTTSDASSSNLLKNEESEPLNESTSLIEHRKRHGLYYLPSEKSEIVPDEYPRANDPKSNSNINDEAAELVKLTEQSLLLKKRTIQTKPRPVVVKLDDGDLTPISVKRPEPRDDSLSGAIKDVLLGSETGPSVSRSYPSDKSSRKQKEKKKLSTNDRSEMKENAVDSEKPDLEIPNSSSKNHGHSKERKHRGKEKIVEGEEHDQKEKKKSGHRHGRRKTHQRAKSPLNVASQTPVIPDFLL 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03606 975 MobiDBLite consensus disorder prediction 835 851 - -
Phco4g03606 975 MobiDBLite consensus disorder prediction 925 942 - -
Phco4g03606 975 MobiDBLite consensus disorder prediction 874 909 - -
Phco4g03606 975 PANTHER DELTA ADAPTIN-RELATED 1 974 IPR017105 GO:0015031|GO:0030123
Phco4g03606 975 Gene3D - 4 543 IPR011989 -
Phco4g03606 975 MobiDBLite consensus disorder prediction 723 756 - -
Phco4g03606 975 PIRSF AP3_delta 1 560 IPR017105 GO:0015031|GO:0030123
Phco4g03606 975 PIRSF AP3_delta 592 969 IPR017105 GO:0015031|GO:0030123
Phco4g03606 975 MobiDBLite consensus disorder prediction 723 761 - -
Phco4g03606 975 Pfam Adaptin N terminal region 31 493 IPR002553 GO:0006886|GO:0016192|GO:0030117
Phco4g03606 975 MobiDBLite consensus disorder prediction 835 975 - -
Phco4g03606 975 MobiDBLite consensus disorder prediction 943 957 - -
Phco4g03606 975 SUPERFAMILY ARM repeat 30 660 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03606 Phco-Chr4 55936018 55938945 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03606 4 55936018 55938945 Phco4g03606 4 55936018 55938945 ECH