Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03579 ATGAACATTTGTGGTTGTTGGGTATCATCAATGAAAATCCCTTTTCACGGGTGGCGCTACTCAAGGCCGTTTTTCTCTCTATCTTCTTCGTCTCGCCATCGCATTATGACCATTCAAAATTGTTCTTCTAATTCTTCTTCTTCTCCTGCTTCCATATCAACGGAGTCCAAAGAGAAGAAGAAGGAAAATTTACCTTGGTTGATCGTTGGCCTCGGCAATCCTGGCAAAAAGTACGCTGCCACTCGCCACAATGTGGGCTTTGAGATGGTTGATGCCATAGCTGAAGCTGAAGGGATATCTATGAGCTCTGTTTCCTTCAAAGCGTTATTTGGGAAAGGTTTAATAGGTGACGTACCAGTCATACTTGCAAAACCTCAGACTTTTATGAATTCAAGCGGTGAATCTGTTGGGGCCATAGTTTCATACTACAAGATTCCACTGAAGCAAGTACTTGTGATCTTTGATGACTTGGATTTACCTTTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGCCACAATGGGATGAAGAGTGTTATTAATCATTTCAAAGGGAATACTAGTTTTCCTCGTTTAAGAATTGGCATTGGACGACCTCCCGGTAAAATGGATCCTGTAGCATTTGTTCTTCGCACGTTCACTAAACAGGAAAGAGAAGAGTTAAATTTTACATTACAAGATGGAATAGAAGCTCTGCGGATTCTTTTGCTTGAGGGATTTGATAGAAGTGCAACATTTGTTAATAGTTCCAAAAAGATAGAGCAAACAGTTGCAATTAACTTCTTTGATAATGATCGCATAAGATCATCTTTTCTGTTTGTAAAGATCCCATCTTTAGCTGCCAGCAAGTTAATAGCTCAAACACACATCTGTCTTTAA 885 0.4023 MNICGCWVSSMKIPFHGWRYSRPFFSLSSSSRHRIMTIQNCSSNSSSSPASISTESKEKKKENLPWLIVGLGNPGKKYAATRHNVGFEMVDAIAEAEGISMSSVSFKALFGKGLIGDVPVILAKPQTFMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNTSFPRLRIGIGRPPGKMDPVAFVLRTFTKQEREELNFTLQDGIEALRILLLEGFDRSATFVNSSKKIEQTVAINFFDNDRIRSSFLFVKIPSLAASKLIAQTHICL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03579 294 NCBIfam aminoacyl-tRNA hydrolase 66 235 IPR001328 GO:0004045
Phco4g03579 294 Pfam Peptidyl-tRNA hydrolase 67 244 IPR001328 GO:0004045
Phco4g03579 294 FunFam Peptidyl-tRNA hydrolase 63 253 - -
Phco4g03579 294 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 78 91 IPR018171 GO:0004045
Phco4g03579 294 Gene3D - 50 252 IPR036416 GO:0004045
Phco4g03579 294 Hamap Peptidyl-tRNA hydrolase [pth]. 65 243 IPR001328 GO:0004045
Phco4g03579 294 PANTHER PEPTIDYL-TRNA HYDROLASE 52 251 IPR001328 GO:0004045
Phco4g03579 294 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 171 181 IPR018171 GO:0004045
Phco4g03579 294 SUPERFAMILY Peptidyl-tRNA hydrolase-like 65 250 IPR036416 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03579 Phco-Chr4 55711639 55715005 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03579 4 55711639 55715005 Phco4g03579 4 55711639 55715005 ECH