Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03420 ATGGCTGGCTTGTTGGCAAGCCGTTCTCTGATTGTTCTTGCCATTATAACCTTCGGATGTGTATTTGCAATTTCCATTGCAAAGGAGGAAGCTACCAAGTTGGGGACGGTCATTGGGATTGATCTTGGAACGACCTATTCTTGTGTTGGTGTTTATAGAAATGGCCATGTCGAAATCATAGCCAATGACCAAGGTAACCGTATCACTCCATCGTGGGTTGCCTTCACCGACAGTGAGAGACTCATTGGGGAGGCTGCCAAGAATCAGGCTGCTGTAAACCCCGAAAGGACCATCTTCGATGTTAAAAGACTTATTGGAAGAAAGTTTCAAGATAAGGAAGTTCAAAGAGACATGAAGCTCGTTCCTTACAAAATTGTCAACAAGGATGGAAAACCTTACATAGAGGTAAAAATTAAGGATGGTGAAACCAAGGTGTTCAGCCCTGAGGAAATCAGTGCCATGATTCTGACTAAGATGAAGGAAACCGCGGAAGCATTCCTTGGGAAGAAAATTAATGATGCTGTGGTCACTGTCCCAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGACGCTGGTGTCATTGCTGGTCTCAATGTTGCTAGAATTATTAACGAACCCACTGCTGCTGCCATTGCATATGGATTGGACAAGAAAGGTGGCGAGAAGAACATTCTAGTCTTTGATCTTGGGGGTGGGACATTTGATGTCAGTATCTTGACAATTGATAATGGTGTTTTTGAGGTTCTTGCAACAAATGGAGATACTCATCTTGGAGGTGAGGACTTTGATCATAGAATAATGGAGTACTTCATTAAATTGATCAAGAAGAAGCATTCAAAGGACATTAGCAAGGACAACAGAGCACTTGGCAAGCTGAGGAGAGAGGCCGAGCGTGCGAAGAGAGCTCTCAGTAGCCAGCACCAGGTCCGCGTGGAAATTGAATCGCTTTTTGATGGTGTTGATTTCTCTGAGCCACTCACCCGAGCTCGGTTTGAGGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGACCAGTGAAGAAGGCCATGGAAGATGCTGGATTACAGAAGAGTCAGATTGACGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCGAAGGTTCAACAGCTTTTGAAGGATTACTTTGAAGGAAAGGAACCAAACAAGGGTGTGAACCCTGATGAAGCAGTTGCCTATGGTGCTGCAGTGCAAGGAAGCATTTTGAGCGGAGAGGGCGGTGAAGAAACCAAAGATATCCTTCTCTTGGATGTGGCTCCCCTCACCCTTGGAATTGAAACTGTTGGTGGAGTGATGACAAAGTTGATTCCCAGAAACACTGTTATCCCTACCAAGAAATCTCAGGTGTTTACCACCTACCAGGACCAGCAGACCACAGTCTCCATTCAGGTTTTCGAAGGTGAGAGGAGTCTCACAAAGGACTGCCGTCTGCTTGGGAAGTTTGATCTGTCAGGAATTCCTCCAGCTCCAAGGGGTACTCCTCAAATTGAAGTGACGTTTGAAGTTGACGCAAATGGCATTCTGAATGTGAAAGCGGAAGACAAAGGCACTGGTAAATCAGAAAAGATCACCATTACAAATGAAAAGGGACGTCTGAGCCAGGAGGAAATCGAGAGAATGGTTCGTGAGGCCGAGGAGTTTGCGGAGGAAGACAAAAAGGTGAAGGAGAGAATTGATGCTCGTAACAGTCTTGAAACCTACGTCTACAACATGAAAAACCAGATCAGTGACAAGGACAAACTGGCTGACAAGTTGGAGTCAGATGAAAAGGAGAAAATAGAGAGTGCAGTGAAGGAAGCATTGGAATGGCTGGATGAGAACCAGAGTGTGGAGAAAGAGGAATATGAGGAGAAGCTGAAGGAGGTGGAAGCCGTTTGCAACCCAATCATCAGTGCTGTGTATCAGAGATCAGGAGGAGCCGCAGGTGGTGAATCAGGCGAGGACGAGGATGATTCTCACGACGAGCTCTAG 1998 0.46 MAGLLASRSLIVLAIITFGCVFAISIAKEEATKLGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVPYKIVNKDGKPYIEVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDHRIMEYFIKLIKKKHSKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQISDKDKLADKLESDEKEKIESAVKEALEWLDENQSVEKEEYEEKLKEVEAVCNPIISAVYQRSGGAAGGESGEDEDDSHDEL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03420 665 MobiDBLite consensus disorder prediction 644 665 - -
Phco4g03420 665 Coils Coil 580 600 - -
Phco4g03420 665 Gene3D - 38 409 - -
Phco4g03420 665 FunFam Heat shock 70 kDa 416 570 - -
Phco4g03420 665 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 568 650 IPR029048 -
Phco4g03420 665 ProSitePatterns Heat shock hsp70 proteins family signature 1. 40 47 IPR018181 -
Phco4g03420 665 Gene3D - 571 645 IPR029048 -
Phco4g03420 665 FunFam Heat shock 70 kDa 260 343 - -
Phco4g03420 665 SUPERFAMILY Actin-like ATPase domain 222 413 IPR043129 -
Phco4g03420 665 Gene3D - 220 394 - -
Phco4g03420 665 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 416 570 IPR029047 -
Phco4g03420 665 Coils Coil 602 634 - -
Phco4g03420 665 Pfam Hsp70 protein 37 644 IPR013126 GO:0005524|GO:0140662
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 234 244 - -
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 36 49 - -
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 421 440 - -
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 86 94 - -
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 362 378 - -
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 174 194 - -
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 394 414 - -
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 502 518 - -
Phco4g03420 665 PRINTS 70kDa heat shock protein signature 64 76 - -
Phco4g03420 665 FunFam Heat shock protein 70 38 229 - -
Phco4g03420 665 PANTHER HEAT SHOCK PROTEIN 70KDA 37 608 IPR013126 GO:0005524|GO:0140662
Phco4g03420 665 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 417 574 IPR029047 -
Phco4g03420 665 CDD HSPA5-like_NBD 35 409 IPR042050 -
Phco4g03420 665 Gene3D Actin; Chain A, domain 4 260 343 - -
Phco4g03420 665 SUPERFAMILY Actin-like ATPase domain 35 219 IPR043129 -
Phco4g03420 665 FunFam Luminal-binding protein 5 570 645 - -
Phco4g03420 665 Coils Coil 284 304 - -
Phco4g03420 665 ProSitePatterns Heat shock hsp70 proteins family signature 2. 228 241 IPR018181 -
Phco4g03420 665 Coils Coil 546 566 - -
Phco4g03420 665 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03420 Phco-Chr4 54438468 54441837 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03420 4 54438468 54441837 Phco4g03420 4 54438468 54441837 ECH