Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03418 ATGGCCATCCTCTCTCAATCCACTGCCAGTTTCTCTCCTTCCTTCGTTTCCACCCGCTCCGATTTCACTCGCCTCACTCGCTTCCCCTGCCATGTCACCTTCCGCCGTCGCTTCACCGTTTCCTCATGCTTCAACTCCTCTAAGTCTCCTGGCGCCGGCGGGTTCCTCTCGCCGGACAACGGAGGTGACGTTTCCTACGAGCTGCATCATGACTTATCGGCGCAGCGCCGCCGCAGCGGCTCGCCGGTGTTCGTCACGATGCCGGTGAATTCTGTCAGCCGGGAGGGAGGCCGAGTCTTGAGGCCTAAGGCGATGATGTTCTCGCTCAAGGCGCTCGCCACGGCCGGCGTCGAAGGTGTCGTGGTCGAGATTTGGTGGGGCTTGGTTGAGAAGAACAAACCTAGGGTTTACGATTGGAGAGGGTACGAGGAACTTGTCGCGATGGCATGCAAGTGTGGCCTCAAGGTTCGAGCGGTTCTCGCCTTTCATCAGCATGGCGCAGGACCTGATGATCCCAATTGGATACCGCTTCCTCTATGGGTGCTTGATGAGATACAGAAAGATGTAGAGTTAGCATATTGTGACCGGTTTGGAAGAAGAAATATTGAATACATTTCCCTTGGATGTGATATTCTTCCTGTGCTGTGTGGGCGTTCTCCTATTCAAGTGTATGCTGATTTTATGAGAGATTTTAAGGACACTTTCAGGTCTTTGCTTGGTGTTATCATTACAGGTGTACAGATTGGCATGGGTCCTGGTGGTGAACTAAGGTATCCTTCGTCCTCTTTAGAAGAGCCAAATTTGAGATGGTCTGGTGAACTTGGAGAATTTCAATGCTATGACAAGTATATGCTTGCTTCTCTGAATGCCTCTGCAAGAAATATTGGAATGCGTGAATGGGGAAATGGTGGTCCATTTGGTACTGGAAGTTTGATGCACAATCCTGAACATACTGATTTTTTCAAAAATGATGGTGGTTCTTGGGACACACCATATGGTAAATTTTTCCTTGAATGGTACTCAGACATGTTGCTGCTGCATGGGGAAAGGATTTGTAGAGAAGCTGAAACTATATTTAGGGGTATAGAAGTTCATATATCAGCAAAATTGGCTGCCATTCACTGGCACTATGTCACACAATCCCATCCATCAGAGTTAACAGCTGGCTATTATAACACTTTTAACCGCGATGGCTACTTACCCATTGCCCGCATGTTTAGTAAGTATGGATTCTCGATGTGCTGCTCTTGTTTTGAAATGCAAGATGCAATAATGCAGAAGATCAATCCAGATGGCAGCCCTGAAGGTTTTCTTAGACAGCTTTTGTTGGCTGCTAGACTCTGTGACCTATCACTTGAAGGTCAAAATTTTTCAACTAATTTGGATGATGGTGCATTCACCCAGGTGCTGAAGATGTCAAAATTTTACTCGAATGGGATAGAGAAGCGACCTTTCTCGTTCAACTTTGTAAGAATGGACAAAAGATTGTTTGAATCCCGAAATTGGGATCGGTTTACTCGTTTTGTAAGACAAATGTCTAATGGAAATATCTTCCGAGCCAGATTATATTCTGTTGGTGACATACGGTTTAAGGCTGCACCAGTGATGGCAGAGGCGAGATTGTTGTACCACCTATATCAGTACTCTTGA 1650 0.4661 MAILSQSTASFSPSFVSTRSDFTRLTRFPCHVTFRRRFTVSSCFNSSKSPGAGGFLSPDNGGDVSYELHHDLSAQRRRSGSPVFVTMPVNSVSREGGRVLRPKAMMFSLKALATAGVEGVVVEIWWGLVEKNKPRVYDWRGYEELVAMACKCGLKVRAVLAFHQHGAGPDDPNWIPLPLWVLDEIQKDVELAYCDRFGRRNIEYISLGCDILPVLCGRSPIQVYADFMRDFKDTFRSLLGVIITGVQIGMGPGGELRYPSSSLEEPNLRWSGELGEFQCYDKYMLASLNASARNIGMREWGNGGPFGTGSLMHNPEHTDFFKNDGGSWDTPYGKFFLEWYSDMLLLHGERICREAETIFRGIEVHISAKLAAIHWHYVTQSHPSELTAGYYNTFNRDGYLPIARMFSKYGFSMCCSCFEMQDAIMQKINPDGSPEGFLRQLLLAARLCDLSLEGQNFSTNLDDGAFTQVLKMSKFYSNGIEKRPFSFNFVRMDKRLFESRNWDRFTRFVRQMSNGNIFRARLYSVGDIRFKAAPVMAEARLLYHLYQYS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03418 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 364 380 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 251 273 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 159 180 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 116 130 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 328 347 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 381 392 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 399 422 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 137 155 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 SUPERFAMILY (Trans)glycosidases 79 537 IPR017853 -
Phco4g03418 549 Pfam Glycosyl hydrolase family 14 103 508 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 70 514 IPR001554 GO:0000272|GO:0016161
Phco4g03418 549 Gene3D Glycosidases 72 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03418 Phco-Chr4 54424979 54427458 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03418 4 54424979 54427458 Phco4g03418 4 54424979 54427458 ECH