Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03409 ATGGATGTGCCACAAACTCCAACCCCCTCTCCACATTTGTATCCACAACAACTTCAACTTAAACTTTACCAAGCCTTCATATTCTCCATTCCCATACTCTTTTCCATCATTCTGGTTCTCTTGTTTTACTTGTTCTACCTCAAAAAGAGAGCTGCATCTCTCTCATCACCACCTCTCCACATACTTACCACCACTGCTAATCCTCAAACTACGTATCCTTACCCTTCACAACCTTGCCGATTAGATCTGACAGTACAATTTCTTGACAAACTTCCAAGAATTTTATTTGATGAGGATTTTGGAACAAGAGATTCAGTATGTTGTGTTTGCCTTGGAGAATTTGAGCTGAAGGAAGAGCTGCTACAAATTCCTTATTGCAAGCATGTGTTTCATATAAGCTGCATATGCAACTGGTTGCAATCAAACTCCACGTGTCCACTTTGTAGATGTTGCATCATTCCCTCTACCAAGTTCCTTAATCCAACCCCACCTATTGTATCAGACCCACCCCACCAAGGTGGAACTTCAGCCTCTTCATCACACATCATCACGTCAATGCCCCAGTAA 567 0.4198 MDVPQTPTPSPHLYPQQLQLKLYQAFIFSIPILFSIILVLLFYLFYLKKRAASLSSPPLHILTTTANPQTTYPYPSQPCRLDLTVQFLDKLPRILFDEDFGTRDSVCCVCLGEFELKEELLQIPYCKHVFHISCICNWLQSNSTCPLCRCCIIPSTKFLNPTPPIVSDPPHQGGTSASSSHIITSMPQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03409 188 PANTHER RING-H2 FINGER PROTEIN ATL16 8 167 IPR044600 GO:0016567|GO:0016740
Phco4g03409 188 Pfam Ring finger domain 107 149 IPR001841 -
Phco4g03409 188 SMART ring_2 107 148 IPR001841 -
Phco4g03409 188 CDD RING-H2_EL5-like 107 149 - -
Phco4g03409 188 MobiDBLite consensus disorder prediction 169 188 - -
Phco4g03409 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 154 IPR013083 -
Phco4g03409 188 FunFam Putative E3 ubiquitin-protein ligase RHA4A isoform A 76 154 - -
Phco4g03409 188 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Phco4g03409 188 MobiDBLite consensus disorder prediction 164 188 - -
Phco4g03409 188 SUPERFAMILY RING/U-box 85 159 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03409 4 54372832 54374393 Phco4g03409 4 54372832 54374393 ECH