Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03398 ATGTCTAAGTCTATAAGCTGCTTTTGCTTGAAGAAAGCCAGACCAAAGACTAAACTAGAACTATCCACCCTTCTTGCTTCGGAAACATCCTTTACTGTGAATGAGATTGAGGCTTTGCTTTGCACGTTTAAGAAACTAAGTAGTGCAATTGTTGATGATGACTTCCTTCACAAGGAGGAGTTCCATCTTGCACTTTTTAATAATGGTAGCAAGCAGAATCTATTTGCAGATAGGGTATTTGATATGTTTGACATCAAGCGTGATGGAGTAATTAGCTTTGGGGAGTTTGTTCGCTCACTTAGTATCTTTCATCCAAATGCCTCTGATGAGGAGAAAATCGAATTTGCATTTAGATTGTTTGACCTTAGACAGAGTGGATACATTGAGCGTCACGAGTTGAAGGAAATGGTGTTGGCTACGCTCACTGAATCAGATGTTACAGTTCCCGATGATGTTGTTGAAGCAATTGTGGACAAGACAATGACGGAGGTTGATTCAAAAGGAGATGGAAAGATAGATAACGAAGAGTGGAGAGATTATGTGACAAAAAATCCTTCTCTTCTGAAGATCATGACCCTACCCGATCTAAAGGATATAACTCTGGCATTTCCCAGCTTTATTTTGCACTCTGAGGTGGAAGACTACCTACACTAG 654 0.4006 MSKSISCFCLKKARPKTKLELSTLLASETSFTVNEIEALLCTFKKLSSAIVDDDFLHKEEFHLALFNNGSKQNLFADRVFDMFDIKRDGVISFGEFVRSLSIFHPNASDEEKIEFAFRLFDLRQSGYIERHELKEMVLATLTESDVTVPDDVVEAIVDKTMTEVDSKGDGKIDNEEWRDYVTKNPSLLKIMTLPDLKDITLAFPSFILHSEVEDYLH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03398 217 Gene3D - 23 215 - -
Phco4g03398 217 ProSiteProfiles EF-hand calcium-binding domain profile. 71 106 IPR002048 GO:0005509
Phco4g03398 217 PANTHER CALCINEURIN B 9 214 IPR045198 GO:0005509|GO:0019722|GO:0019900
Phco4g03398 217 PRINTS Recoverin family signature 126 144 - -
Phco4g03398 217 PRINTS Recoverin family signature 172 192 - -
Phco4g03398 217 PRINTS Recoverin family signature 79 100 - -
Phco4g03398 217 ProSiteProfiles EF-hand calcium-binding domain profile. 108 143 IPR002048 GO:0005509
Phco4g03398 217 Pfam EF-hand domain pair 110 177 IPR002048 GO:0005509
Phco4g03398 217 FunFam calcineurin B-like protein 3 22 214 - -
Phco4g03398 217 SUPERFAMILY EF-hand 26 206 IPR011992 -
Phco4g03398 217 ProSiteProfiles EF-hand calcium-binding domain profile. 152 187 IPR002048 GO:0005509
Phco4g03398 217 Pfam EF hand 77 98 IPR002048 GO:0005509
Phco4g03398 217 SMART efh_1 156 184 IPR002048 GO:0005509
Phco4g03398 217 SMART efh_1 75 103 IPR002048 GO:0005509
Phco4g03398 217 SMART efh_1 112 140 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03398 Phco-Chr4 54295370 54297316 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03398 4 54295370 54297316 Phco4g03398 4 54295370 54297316 ECH