Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03384 ATGGCAGTCACTCACATCTTATCTCATATCACCCTCACAGTAAGCTTCGTCTTCACCATCCTGATCTCGTTCCAGTTCTGGTCAAATCGACATCAAAGTGAGACTGGCGTAGTTTCAGTTCGTTTCATTTCAATAATTTTATATCTGCCTCCAATTTCAGAAAAACCCGAGAAAGAGAGCGAACGGAAGATGAAGACCGAAAGTGAATTGGTTGGACTCTGCATAGAGGCAGCATGTGAGAGCAGAGAAAGCGTCGAAAAATGGCGAATGCAGAGGCGCAGTCTCGACCGCTTACCTTCTCCTCTCGCCGACGCTCTCCTCCGCCGCCTCATCGCCAGTCGTCTCCTCTACCCTTCCCTCCTCGAGGTTTTCAAACACAGCGCCGAAGAGGTTGACGTGAGGGACAACGGCACCGTGGACGCGGAATGGATGGCGTATTTGGGAGCCTTTCGTAACTTGCGCTACTTGAACCTCGCGGATTGTCATCGAATCACCACTTCAGCTCTTTGGCCAATTACAGGAATGACTAGTCTTCAGGAGTTGGATCTGTCTAGATGCTTCAAGGTCAATGATGCTGGAATTAGCCATCTTCTCTCCATTCCTAATCTGGAGAAGTTGCGCATTTCAGAAACTGGCGTCACTGCCAAAGGAGTCAAGCTTCTTTCCTCTCTTGAAAACTTGTCTTTTCTTGACTTAGGTGGCTTGCCCGTAGATGATGTGTCGTTAACTTCGTTACTGGTACTGAAAAGGCTACAATATATTGATCTATGGGGTAGTAAAATATCAAATGAAGGTGCTGCTGTTCTCAATATGTTCCCAAAGTTGACTTATCTCAATCTTGGCTGGACCAGTGTCACAAAATTGCCTACATTATCATCTCTTGAATGCTTGGACATGAGTAACTGTACTATTGATTCTATACTTGAAGATGACAAATCTCCTTTAGCAAAGCTTATTTTTTCTGGGGCTACATTCCTGAATGAAGCTGAAGCCTTCTTGTATGCAAATACAAATCTCGTATCCTTTTTGGATGTAGCCCATACCAGCCTGAATAAATTCTTCTTCTTAAGTAAAATGAAAGTAATAGAACATCTCAATCTCAGCTCATGCATGATGGGGGACGATTCAGTTGAGATGGTTGCATGTGTTGGTGGTAACTTGAAAAGTCTGAATCTTAGTGGTACCAAGGTTACTTCTGCTGGATTAGGGATTTTAGCTGGACATGTTCCCTATCTTGAAACTCTATCATTATCTCAGACACCAGTGGATGACACTGCCATCTCATTTATCAGTATGATGCCTTCATTAAAGGATGTTGACCTGAGCAATACAAACATTAGAGGTTTTCTACAACAAGGAAGGATTGATGTGGACTCCCCACTCTCCCTGATGGCTTTGCAAAATCTTAAATTAGAAAGGTTGAATTTGGAGCATACGCAAGTTAGGGACGAAGCTTTATACCCCTTGTCAAGCTTCCTAGAACTAAGATATTTATCACTTAGAAGTGCTTCACTTGCAGACGTCTCACTTTTCTATTTATCGTCAATTCCTAAATTGACAAATCTTAGTGTTTGTGATGCGGTATTGACAAATTATGGGATTGATATATTTAAGGCTCCTGAAACTCTGAAAGTGCTGGACCTCCGAGGTTGTTGGCTTCTAACTGAAGACACTATCTTGTCATTCTGTAGACATCATCCACAAGTTGAAGTCAGACATGATCTGGGTACTGTATATCCTTTTAATCAAAATGGTCCTAATCATTCCTCTCCATCTCGATCAACTTCTAGGACTGTGCAAATGGCTAAGAAGAAAGATCAAGTTCCGGTATTTCCGTATCTTGCAGACCAAAGATTAAAGTACAGCAGGGATGAGTTACTTATATTGCAGTTTGCGTCTTTGCCTCTTGCATCTAGTAGTGAGAGTGGCAATTCAATATTTGAGAAACAATTGGACTGA 1959 0.4237 MAVTHILSHITLTVSFVFTILISFQFWSNRHQSETGVVSVRFISIILYLPPISEKPEKESERKMKTESELVGLCIEAACESRESVEKWRMQRRSLDRLPSPLADALLRRLIASRLLYPSLLEVFKHSAEEVDVRDNGTVDAEWMAYLGAFRNLRYLNLADCHRITTSALWPITGMTSLQELDLSRCFKVNDAGISHLLSIPNLEKLRISETGVTAKGVKLLSSLENLSFLDLGGLPVDDVSLTSLLVLKRLQYIDLWGSKISNEGAAVLNMFPKLTYLNLGWTSVTKLPTLSSLECLDMSNCTIDSILEDDKSPLAKLIFSGATFLNEAEAFLYANTNLVSFLDVAHTSLNKFFFLSKMKVIEHLNLSSCMMGDDSVEMVACVGGNLKSLNLSGTKVTSAGLGILAGHVPYLETLSLSQTPVDDTAISFISMMPSLKDVDLSNTNIRGFLQQGRIDVDSPLSLMALQNLKLERLNLEHTQVRDEALYPLSSFLELRYLSLRSASLADVSLFYLSSIPKLTNLSVCDAVLTNYGIDIFKAPETLKVLDLRGCWLLTEDTILSFCRHHPQVEVRHDLGTVYPFNQNGPNHSSPSRSTSRTVQMAKKKDQVPVFPYLADQRLKYSRDELLILQFASLPLASSSESGNSIFEKQLD 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03384 652 Pfam Leucine Rich repeat 467 489 IPR001611 GO:0005515
Phco4g03384 652 MobiDBLite consensus disorder prediction 580 599 - -
Phco4g03384 652 SUPERFAMILY RNI-like 411 565 - -
Phco4g03384 652 PANTHER - 356 485 - -
Phco4g03384 652 SUPERFAMILY RNI-like 132 448 - -
Phco4g03384 652 SMART LRR_CC_2 176 200 IPR006553 -
Phco4g03384 652 SMART LRR_CC_2 492 516 IPR006553 -
Phco4g03384 652 SMART LRR_CC_2 224 248 IPR006553 -
Phco4g03384 652 SMART LRR_CC_2 384 408 IPR006553 -
Phco4g03384 652 SMART LRR_CC_2 150 175 IPR006553 -
Phco4g03384 652 Gene3D Ribonuclease Inhibitor 292 611 IPR032675 -
Phco4g03384 652 Gene3D Ribonuclease Inhibitor 208 291 IPR032675 -
Phco4g03384 652 Gene3D Ribonuclease Inhibitor 76 207 IPR032675 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03384 4 54193509 54201067 Phco4g03384 4 54193509 54201067 ECH