Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03383 ATGGAAAAGCTCATTTGCATCTCCCCTTTCCTCCTTCTTCTTCTGTCCCTTCCTTTTTCCTCTGCTGGCCACGACTATGGTCAAGCTCTCAGCAAGAGCCTTCTTTTCTTTGAAGCCCAGAGATCTGGCTACCTTCCCCACAACCAGAGAGTCACATGGAGAGCACATTCTGGTTTGCAGGACGGCAAAGCTAGCGGGGTGGATCTAGTTGGAGGGTACTATGATGCAGGGGACAATGTGAAGTTCGGGTTACCCATGGCGTTCACCGTTACGATGATGTCGTGGAGCATAATTGAATACGGCAAACAAATGGCTGCTAGCGGTGAGCTTGGTCACGCCATGGAAGCAGTGAAGTGGGGTACAGACTACTTCATCAAAGCACACCCTCAGGCCAATGTTCTCTACGGAGAGGTGGGAGACGGAAACACTGACCATTACTGCTGGCAAAGGCCAGAGGACATGACAACGGACCGTCACGCTTACAAGATCGATCCGAGCAATCCCGGGTCGGATCTCGCCGGAGAAACCGCCGCCGCTATGGCCGCCGCATCCATCGTTTTCAGACGTTCTAACCCTGCTTATTCCCGCGAACTTCTCAGTCATGCCTACCAGTTGTTCGATTTTGCTGACAAATACAGAGGCAAATATGACAGCAGCATTACTGTTGCTCAGAAGTATTACAGATCAATCAGTGGCTACAATGATGAATTGCTCTGGGCTGCTGCTTGGTTGTATCAAGCATCTAACAATCAGTATTACTTGGATTACCTTGGAAGAAACGGTGATTCCATGGGTGGAACTGGTTGGAGCATGACTGAATTTGGTTGGGATGTCAAGTATGCTGGGGTTCAGACATTGGTTGCCAAGTTCTTGATGCAGGGCAAAGCTGCCCATCATGCACCAGTTTTCGAGAGATATCAGCAGAAGGCTGAATCTTTCATGTGTTCATGCCTTGGAAAGGGTTCTCGCAATGTTCAGAAGACTCCTGGTGGCCTCATCTTCCGTCAGAGATGGAACAACATGCAGTTTGTCACAAGTGCTTCATTTTTAGCCACTGTCTATTCTGACTACCTTGTTTCATCTGGTAGGAACTTGAGATGTAATTCAGGCAATGTTGCCCCGGCTGAACTTCTTTCCCTTGCAAAGTCTCAGGTGGACTACCTTCTTGGGAACAACCCAAGAGCAACTAGTTACATGGTGGGCTATGGAAGCAACTTCCCACAAAGGGTTCATCACCGAGGTTCATCCATTGTTTCAATCAAGGCTAACCCTTCATTTGTCAGCTGCCGTGGAGGTTATGATACTTGGTTTAGCAGCAAAAAGAGTGACCCCAACCTACTCACTGGAGCTCTTGTTGGTGGACCTGATGCCTATGATGACTTTGCCGATGAAAGAGATAATTATGAGCAGACAGAGCCAGCAACCTATAACAATGCTCCTCTCATTGGTATTCTAGCACGTCTGAGTGGTCGCAGTGGCTATAACCAGCTTCTTCCAGTTGTTCCCGCTCCTAAGCCTATTGCTATCAAGCCTCAACCATCCCCCAATACCAAGACCACTCCATCTCCAGCTTCATGGTCAAGCCCAATTTCTATTGAAGAGAAAATTACTACCTCATGGGTTGCCAATGGAAAAACTTATTACAGATACTCAACAGTGGTGACAAACAAATCTAACAAGAGTCTCAATTCTCTCAATCTTTCAATCTCCAAGCTTTATGGTCCAATCTGGGGTCTCACAAAGTCTGGTGATTCCTACACATTCCCATCATGGCTCAGCTCCCTAGCAGCGGGCAAAAGCCTTGAATTTGTCTACATCCATTCTACTTCTCCAGCAGATGTCTCTGTGGCTAACTACGTGTTGGCCTGA 1869 0.4773 MEKLICISPFLLLLLSLPFSSAGHDYGQALSKSLLFFEAQRSGYLPHNQRVTWRAHSGLQDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMEAVKWGTDYFIKAHPQANVLYGEVGDGNTDHYCWQRPEDMTTDRHAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPAYSRELLSHAYQLFDFADKYRGKYDSSITVAQKYYRSISGYNDELLWAAAWLYQASNNQYYLDYLGRNGDSMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAAHHAPVFERYQQKAESFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLVSSGRNLRCNSGNVAPAELLSLAKSQVDYLLGNNPRATSYMVGYGSNFPQRVHHRGSSIVSIKANPSFVSCRGGYDTWFSSKKSDPNLLTGALVGGPDAYDDFADERDNYEQTEPATYNNAPLIGILARLSGRSGYNQLLPVVPAPKPIAIKPQPSPNTKTTPSPASWSSPISIEEKITTSWVANGKTYYRYSTVVTNKSNKSLNSLNLSISKLYGPIWGLTKSGDSYTFPSWLSSLAAGKSLEFVYIHSTSPADVSVANYVLA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03383 622 Gene3D - 23 491 IPR012341 GO:0005975
Phco4g03383 622 Pfam Glycosyl hydrolase family 9 26 485 IPR001701 GO:0004553|GO:0005975
Phco4g03383 622 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Phco4g03383 622 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 387 413 IPR018221 -
Phco4g03383 622 PANTHER ENDO-1,4-BETA-GLUCANASE 11 490 - -
Phco4g03383 622 SMART CBM49_2 530 610 IPR019028 GO:0030246
Phco4g03383 622 Pfam Carbohydrate binding domain CBM49 530 607 IPR019028 GO:0030246
Phco4g03383 622 SUPERFAMILY Six-hairpin glycosidases 24 498 IPR008928 GO:0005975
Phco4g03383 622 FunFam Endoglucanase 22 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03383 Phco-Chr4 54188527 54192814 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03383 4 54188527 54192814 Phco4g03383 4 54188527 54192814 ECH