Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03370 ATGTTACAGAGTTTTCTCCTTAATTGTTCAACGTGGAGAGAATCTTGTCTTGTCGTCAAAACTCGTCGGTCACATACATGGATCTGCGAACCATTCCACACCTTCTCCTTCCCCTTTCTCCTCAGCTTCGTCACTTTCATTTCTCGTAAAGACTCAACACAGAGCAACTCACTTCCTCTGTTCCATGCTCTGTCACCACTGTTTCTCCAAACAAACAAACACAGAATGAGGACCGATTATTTGAAGCAGAACTTTCCCTTCACCCACAGAAACATCTTCCTCAAGTTGCTCCTCACCTTCTTCTTCATAGGCCTTGCTTTCCGTATTCTCTTCTTTCACTCCCTCTCCTCGCAGATTTCCCCTGTTCTCGAATCCCCATTTCCTCAAAAAGTCACCTTGTCACAGCCCCACAACCCACCTCAACCGTCATCTCTTTCACAACCTGTTTCCGACCCTCCACTTGTTCTGGAACATGTTCCCGAACCTCCACCTTTTCTGGAACGTGTTCCCGAACCCCCACCTGTTCTGGACTATGTTTCTGAAACTGAAGATCAGCTCTCTCCCACAGAATCAGAGCAATGTGATTACTTTAATGGGGATTGGGTCCGGAACCCGTCCGGACCAGCTTACACCAATGAAAGCTGCGACCTTATTGAACCTCCTCAAAATTGTTTGAAGAATGGAAGGCCTGATAGGGAGTTTCTGTATTGGAGGTGGGCTCCTAGACAGTGTGATTTGCCTCAGCTTGATCCACAGAGGTTTCTCAACATGATGCGGAACAAAGCCTGGGCACTCATTGGTGATTCCATTTCCCGCAACCATGTTCAATCCCTGCTTTGCATTCTCTCCAAGGTGGAACAACCTGTCTTAGTCTACCATGATGAGGAATACAAGAGCAAAAGATGGACTTTTCCCTCTTACAACTTCAGTATATCAGTGATTTGGTCGCCATTCCTTGTGGAAGCAGCTATATTTGAAGACATAAATGGAGTTTCGAGTTCTGAAGTTGAGCTACACCTTGACAAACTGGACAGTAAATGGACGGATCAGTACCTGGACTTTGATTACATCATTATTTCAACCGGGAAATGGTTTCTCAAATCCGCAATCTACTATGAGAATGACACCATATTGGGCTGCCACTCCTGTCCTGGGAGGAACCTGACAGAGCTGGGTTTTAATTTCGCATATCGCAAAGCCTTGAAATTTGTGATGAACTTCATAGTTTCTTCAAATCACAAAGGGATGATTTTTTTCAGGACATTCACGGCTGATCATTTTGAGAATGGGGAGTGGTTTAGTGGGGGAACTTGCAATAGAACAGCACCAATAAAAGAAGGTGAGATGGAAATGAAATATTTGAACCAGATGCTGCGTGACATAGAGTTAGATGAGGTTGGAAAGGCAGCTTCTGAAGCTTCAAAAAAAGGGGTGAACTTTAAGCTTGTGGATTTTTCTGCACTCTCACAATTGAGACCTGATGGTCATCCTGGTCCATACAGACAATTTCAACCATTTGCAAAGGACAAGAAAGCTCACGTTCAGAATGATTGTTTGCATTGGTGCTTACCTGGGCCAATAGACACTTGGAATGATATAATAATGGAGATGGTTATGAAGAAGGGGTAA 1629 0.4426 MLQSFLLNCSTWRESCLVVKTRRSHTWICEPFHTFSFPFLLSFVTFISRKDSTQSNSLPLFHALSPLFLQTNKHRMRTDYLKQNFPFTHRNIFLKLLLTFFFIGLAFRILFFHSLSSQISPVLESPFPQKVTLSQPHNPPQPSSLSQPVSDPPLVLEHVPEPPPFLERVPEPPPVLDYVSETEDQLSPTESEQCDYFNGDWVRNPSGPAYTNESCDLIEPPQNCLKNGRPDREFLYWRWAPRQCDLPQLDPQRFLNMMRNKAWALIGDSISRNHVQSLLCILSKVEQPVLVYHDEEYKSKRWTFPSYNFSISVIWSPFLVEAAIFEDINGVSSSEVELHLDKLDSKWTDQYLDFDYIIISTGKWFLKSAIYYENDTILGCHSCPGRNLTELGFNFAYRKALKFVMNFIVSSNHKGMIFFRTFTADHFENGEWFSGGTCNRTAPIKEGEMEMKYLNQMLRDIELDEVGKAASEASKKGVNFKLVDFSALSQLRPDGHPGPYRQFQPFAKDKKAHVQNDCLHWCLPGPIDTWNDIIMEMVMKKG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03370 542 MobiDBLite consensus disorder prediction 130 153 - -
Phco4g03370 542 Pfam PMR5 N terminal Domain 192 245 IPR025846 -
Phco4g03370 542 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 246 537 IPR026057 GO:0016740
Phco4g03370 542 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 111 534 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03370 Phco-Chr4 54099152 54104522 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03370 4 54099152 54104522 Phco4g03370 4 54099152 54104522 ECH