Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03369 ATGCTGGCCTTTGGATTCGATCGGATCAACTTTGTTTACTTCGTTATTCAGCGTCTCCTGGTTTCTTCTGATTCTTTAGTCTCTTTCTCTGCAGTTGCACAAGGTAGCTGCAATTTTGCTTTAGGAGCTTACCCGATTCTTAAGAGAAGAGTAGAAGGGAAACTGAAACCGTATCTCAGAAAGATGGTGAAACATCGCCTTAGAGAGTCTATCAAATCTTTGTTTGGAAGTCATATTGACCCTAACAAAGAAGAGCAGCTCCAGGTAGCTAAAGCAGATATTGAAGACAAAGTGAAAGAAATATTGAAACTTATTAAAAATGACAACCTTGAAGAGGATGGTATTTCTAAGAGGGAACCACTTATTGAACTGATTGAAGATTTCCACAATCAATACCAATTACTGTATGCACAATATGATAATCTAACAGGTGAGTTAAGGAAAAGGATCAAGGGCAAGCGAGAAAATGAGAGTTCTTCATCCAGCTCAGACTCAGATTCAGATTCAGATTATTCTTCAAAGGACAAAGGCAACAAAAACGGACAATTGGAAAATGAATTTCAAAAGACAATCGATGGCTTAAAGCAAGAACTTGAAGTGGTGCATGCAGAAGTGGCTGAATCAAATCGGAAGTTGACAATTTCAAATGAAGAGAAGGAGGATCTTAATTCCAAATATCTTGCAGCACTGAACAAGATACAGGAAGCAGATACAGCTAACATGGATTTGAAAAGTGACGCTGAAGCATTAGGCATTCAAAGATCTAAACTTTTGATTGAGAATGCTGAACTAAATAAACAAGTGGAAATTGCTGCTAAAGTAGAAGCTGAACTGACTCAAAGATTGGAAGAGCTGAAGATAGAAAAAGATAGTTTGACCATGGAGAAGGAGACAGCTCTCCAACAGATTGAGGAGGAAAAGAAGATTACTGATGGCCTCAAAACCCTTGTCGGTCAACTGAAGGATGAGAAATTAGCTCTTATCAAAGAGTTAGAGGCAGTTACAGGTGAACTTTCCGTTCTGAAACAGCAGTTGGAACAGGCTGAACAGAAAATGACAGGTATAAGTCACAATCTGAAAGTTGCTGAGGAAGAAAAAGAATCTTTAAAAGTGCAACTTTCACAGGCTTCAAATGAGGTCCAGCTAGCTCATAGTAGAATACAAGAATTTGTAGCTGAATCAAGTCAGTTAAAGGAAAAACTTGATGAGAGTGGAAGGGAAATTTCTGCCTTTACTCAGATGCATGAAGGGTTTCAGAAAGAATCCTCAAATCGTATCACGGAACTTGAGGCACAGGTCACCTACCTGGAGTTGGAGTTAGAATCACTGAAAAACCAGAAAAGAGATATAGAAGAGCAAATGAAGAGCAGCACCACTGAAGTAAGGGAACTAGGAGAACACAATTCAGGCCTACAAAACCAAATATCACAACTTGAATTGAAGTCCAGAGAAAGAGAAGAGGAGCTATCTGCTATGGTGAAGAAACTTGAAGATAATGAGAATGAGTCATCTTTGAAAATGTCAGATTTAACATTTCAGATAAACAAGCTGCTAACTGATATTGGGACACTACATACTCAAAAAAGTGAACTGGAAGAGCAGATAATTTTTAAAAGTAACGAGGCTTCCACTCAAGTGGAAAGCATTACAAACGAGGTGAATGCATTGCAGCAAGAAGTGACGTCCCTCCAACATCAGAAATCTGACTTGGAAGCTCAGTTAGTAGAAAAAGTCCACGAGAACTCCAAGAATGTGATTGAAATGCAAACTCTGAAAGAGGAAATTGACAGAAAAATCCGGGAACAAGAGAGACTTCTGGAAGACACAGAAAATTTAGCCATGCAGCTAAGGACATTGGAATCAGAGATGAGCACCGTTCAGAACAAAAACAGTGAAGCTGAAGAGCAAATAAGATCTAAAAGCCATGAGATCAGTGAAATGAGACAGGGAATGTTGGAGCTACATGACAGAATAGCAGAAATAGAGAAGATATCAACAGATAGAGAATCAAATTTGTTGATTCTCCAGGATAAGTTTATTAGCGCAGAGCAAGCAGTTTCAACTCAAATAATGGCCTCCAGTGAACAAATTAAGAATCTTGAACATGATTTGGAATCACTGCAGAAAGAGAAACACGAATTAGAACAGCAGTGTGAAAAGCTGAAGTTGGAGGTGGATTCTATACAGAACAAAAAGAGCGAAGTTGAAGAACAAATGAGAACTAAAGACCATGAGAACTCTGGACTAAGAGAAGAAATTTTGGGATTGCAGGGAACGATAGCTGTGCTGGAGAAAACAGTAGCCGAGAAAGAGGCAGAGCTATCCAGTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGTCAAATAACTGGCTTCATAGTCCAGATTGATAATCTAAAACATGATTTGGTGTTCCTGCAGAATGAGAAACAGGAAGTAGAACAGCAGTGTGTAAATCTGAAGATGGAGCTGGATTCCACACAAAACCAGAAAGTTCAAGTTGAAGAGCAGTTGAGAGCTAAAGACCAAGAGAACACGGAACTGAGAGAGGAAAAATTTGGATTGCAGGGAACAATTACTGCACTGCAGAAAACATTAGACGAGGAAGAGGCAGAGCTATCTAGTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGCCAAATAACTTCCTTCACAGTCCAGATTGAAAATCTGAAACATGATCTGGCGTCCTTGCAGAATGAGAAAGAGGAAGTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCTCTCAAAACCAGAAGGGTGAAGTTGAAGAGCAGATAAGAGCTAAAGACCATGTGAACACCCAACTGAAAGAGGAAATTTCGGGATTGCAGGGAACAATTACTGCACTGGAGAACAGATTAGCTGAGAAAGGGTCAGAGTTATCCACTTTACAGGAAAATCTTCACCAAAAGGATAGTGAGGCTTCTGGCCAAATAGCTGCCTTCACAATCCAAATTGATAATCTGAAACATGATTTGGTGTCCCTACAGAATGAGAACCAAGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGGTGGATTCCACACAAAACCAGAAGGGTGAGGTTGAAGAGCAAATCAGAGCTAAAGACCATGAGAACACTGAAATGAGAGAGGAAATTTTAGGATTGCAGGGAACGATTACTGCACTGGAGAAAACATTAGCTGAGAAAGAGTCAGAGTTATCCACTTTAGAGGAAAAGCTTGACGAAAAAGAGAGTGAGGCTTCCGCCCAAGTAATTGCCTTCACGGCCCAAATTGATAATCTGCAGAAAGACTTACTTTCCTTACAAAGAACAAAAGAAGAATTGGAGCTGCACTACGAAAAAATTAGTGAAGAACATGCAGAAAGCCTTGTAATGGCAGAGAATGAAAAGAATGACATATCAAGCAGGACTATGGATCTTAAGAGAACACTAGAAGAGCGAGAAAATTCACACCAGAGGTTAAATGAAGAATATAAAAAAATTGATGGTTTGTTTCAGGAATGCATGGTCAAGCTTGAAGTTGCAGAGAAGAAGATTGAAGAAATGGCAGGAGAGTTTCGTGAAGGCATTGAGTTGAAAGATCAGAAGGTAGCTGCTTTGGAACATGCAGTAGAAGACCTAAAAAGTGACCTAGAAGAGAAAGGAGATGAAATCAGTACTTCGCTTGAGAATGTTCGAATGCTTGAGGTTAAGCTTCGTCTGTCAAACCAGAAGCTGCGGGTCACAGAGCAATTGCTGAGTGAGAAAGAAGAAAGCTTTAGGAAGACGGAGGAAAAGTTTCAGCAAGATCAGAGAGCACTTGAAGAGAGAATTGCTATTTTATCAGCAACAATAACTGCTAACAATGAAGCTTTGGATGGAATTGTCTCTAATGTCAGAGAGTGTGTGAACAGTGTCAGGACTGACATAGAATTTGTAAGCTGTCGAGTTTCTGATGACTGCAAAAATTACGAGGAGTGTGTCTCTAACATCTCAGGCGATATTGAGGTTGTAAAGGGGCAAGTTAGGTATATGAATAAGGAAAAGGAGCAACTAAAGAGAGAGAAAAGGCAGTTGTTGAAGCAACTGCAAGTTAAAAATGAAGAGGAAGTGACTTTGAGGAAAACAGTTGAGAAGCTAGAGGCAAACGCAAGGAAGGAGGAATCAGAGAAGATGAATCTGACAACAACTGTATTACAACTAAAGAAGACAGTTAGAGAGCTGGAGAAAATGATGAAAGAGAAAGAAGATGGTATGTTGGACTTGGGAGAGGAGAAGAGGGAGGTCATCAGGCAGCTGTGTTTGTGGATTGATTATCATCGCAGTCGCTATGACTATCTCAAGGACATTCTATCAAAGACTCGCAGGGGCCAGAGAGCAGCATAA 4407 0.4005 MLAFGFDRINFVYFVIQRLLVSSDSLVSFSAVAQGSCNFALGAYPILKRRVEGKLKPYLRKMVKHRLRESIKSLFGSHIDPNKEEQLQVAKADIEDKVKEILKLIKNDNLEEDGISKREPLIELIEDFHNQYQLLYAQYDNLTGELRKRIKGKRENESSSSSSDSDSDSDYSSKDKGNKNGQLENEFQKTIDGLKQELEVVHAEVAESNRKLTISNEEKEDLNSKYLAALNKIQEADTANMDLKSDAEALGIQRSKLLIENAELNKQVEIAAKVEAELTQRLEELKIEKDSLTMEKETALQQIEEEKKITDGLKTLVGQLKDEKLALIKELEAVTGELSVLKQQLEQAEQKMTGISHNLKVAEEEKESLKVQLSQASNEVQLAHSRIQEFVAESSQLKEKLDESGREISAFTQMHEGFQKESSNRITELEAQVTYLELELESLKNQKRDIEEQMKSSTTEVRELGEHNSGLQNQISQLELKSREREEELSAMVKKLEDNENESSLKMSDLTFQINKLLTDIGTLHTQKSELEEQIIFKSNEASTQVESITNEVNALQQEVTSLQHQKSDLEAQLVEKVHENSKNVIEMQTLKEEIDRKIREQERLLEDTENLAMQLRTLESEMSTVQNKNSEAEEQIRSKSHEISEMRQGMLELHDRIAEIEKISTDRESNLLILQDKFISAEQAVSTQIMASSEQIKNLEHDLESLQKEKHELEQQCEKLKLEVDSIQNKKSEVEEQMRTKDHENSGLREEILGLQGTIAVLEKTVAEKEAELSSLQEKLHEKESEASGQITGFIVQIDNLKHDLVFLQNEKQEVEQQCVNLKMELDSTQNQKVQVEEQLRAKDQENTELREEKFGLQGTITALQKTLDEEEAELSSLQEKLHEKESEASGQITSFTVQIENLKHDLASLQNEKEEVEQQCEKLKMELDSSQNQKGEVEEQIRAKDHVNTQLKEEISGLQGTITALENRLAEKGSELSTLQENLHQKDSEASGQIAAFTIQIDNLKHDLVSLQNENQELEQQCEKLKMEVDSTQNQKGEVEEQIRAKDHENTEMREEILGLQGTITALEKTLAEKESELSTLEEKLDEKESEASAQVIAFTAQIDNLQKDLLSLQRTKEELELHYEKISEEHAESLVMAENEKNDISSRTMDLKRTLEERENSHQRLNEEYKKIDGLFQECMVKLEVAEKKIEEMAGEFREGIELKDQKVAALEHAVEDLKSDLEEKGDEISTSLENVRMLEVKLRLSNQKLRVTEQLLSEKEESFRKTEEKFQQDQRALEERIAILSATITANNEALDGIVSNVRECVNSVRTDIEFVSCRVSDDCKNYEECVSNISGDIEVVKGQVRYMNKEKEQLKREKRQLLKQLQVKNEEEVTLRKTVEKLEANARKEESEKMNLTTTVLQLKKTVRELEKMMKEKEDGMLDLGEEKREVIRQLCLWIDYHRSRYDYLKDILSKTRRGQRAA 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03369 1468 Coils Coil 760 787 - -
Phco4g03369 1468 Coils Coil 268 309 - -
Phco4g03369 1468 Coils Coil 514 534 - -
Phco4g03369 1468 Coils Coil 950 984 - -
Phco4g03369 1468 Pfam KIP1-like protein 75 140 IPR011684 GO:0003779
Phco4g03369 1468 Coils Coil 996 1093 - -
Phco4g03369 1468 MobiDBLite consensus disorder prediction 450 480 - -
Phco4g03369 1468 Coils Coil 1105 1135 - -
Phco4g03369 1468 MobiDBLite consensus disorder prediction 168 182 - -
Phco4g03369 1468 Coils Coil 690 752 - -
Phco4g03369 1468 MobiDBLite consensus disorder prediction 150 182 - -
Phco4g03369 1468 PANTHER COP1-INTERACTIVE PROTEIN 1 913 1027 - -
Phco4g03369 1468 Coils Coil 1342 1432 - -
Phco4g03369 1468 Coils Coil 539 573 - -
Phco4g03369 1468 Coils Coil 426 502 - -
Phco4g03369 1468 Coils Coil 1151 1171 - -
Phco4g03369 1468 Coils Coil 1253 1273 - -
Phco4g03369 1468 Coils Coil 331 407 - -
Phco4g03369 1468 MobiDBLite consensus disorder prediction 463 478 - -
Phco4g03369 1468 Coils Coil 1204 1231 - -
Phco4g03369 1468 Coils Coil 191 225 - -
Phco4g03369 1468 Coils Coil 862 889 - -
Phco4g03369 1468 Coils Coil 894 942 - -
Phco4g03369 1468 Coils Coil 799 854 - -
Phco4g03369 1468 Gene3D - 420 600 - -
Phco4g03369 1468 Gene3D - 712 856 - -
Phco4g03369 1468 Gene3D - 956 1145 - -
Phco4g03369 1468 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 71 146 IPR011684 GO:0003779
Phco4g03369 1468 Coils Coil 588 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03369 Phco-Chr4 54091948 54098924 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03369 4 54091948 54098924 Phco4g03369 4 54091948 54098924 ECH
Phco4g00250 4 1578656 1580857 Phco4g03369 4 54091948 54098924 PCT