Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03356 ATGGACGGTGCAGCAGGAGCTGGATCTTTCGATAGCAGTCCCGACGATTACGACGTCGTTGGATTGCAGGGGATGAATGTGTTGAGGGCCAAGAGTAATGAGAAAGGGTGGAACTTGAATTTGGGAGAATTGGCTAGGATTTGGAAGGGAGGATGCATCATAAGGACAGTTTTATTGGACAAGATCAAGAAGACTTATCGGAGTAATCCTAATTTGTCTAGTTTGATGGTGGACCCGGAATTTGTAAGGGAAATGACGGAGAGGAAGGCTGCATGGGGACGGGTTCGAGCTGGGATTAGTACTCCGGGAATAAGTGCTAGTCTTACTTACTTTGATTACTGCCGGAGGGCCGATCTGCCGTTGAACCTTGTTCAGGCTCAGAGGGACTTCTTTGGGGCGCATACATATGAGAGGGTTGATCGCCCTGGGGCTTTCCATACCGAGTGGACAAAGCTTGCATATTAA 465 0.486 MDGAAGAGSFDSSPDDYDVVGLQGMNVLRAKSNEKGWNLNLGELARIWKGGCIIRTVLLDKIKKTYRSNPNLSSLMVDPEFVREMTERKAAWGRVRAGISTPGISASLTYFDYCRRADLPLNLVQAQRDFFGAHTYERVDRPGAFHTEWTKLAY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03356 154 SMART 6PGD_2 2 150 IPR006114 GO:0004616|GO:0006098
Phco4g03356 154 Gene3D - 118 151 - -
Phco4g03356 154 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 22 151 IPR008927 -
Phco4g03356 154 Gene3D - 20 116 IPR013328 GO:0016491
Phco4g03356 154 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 118 151 - -
Phco4g03356 154 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 22 149 IPR006114 GO:0004616|GO:0006098
Phco4g03356 154 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 23 152 IPR006183 GO:0004616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03356 Phco-Chr4 54018962 54019589 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03356 4 54018962 54019589 Phco4g03356 4 54018962 54019589 ECH